ProfileGDS2819 / 229754_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 70% 65% 78% 64% 70% 55% 39% 65% 69% 74% 66% 62% 73% 69% 68% 66% 62% 70% 53% 59% 61% 67% 63% 64% 61% 61% 58% 65% 68% 68% 77% 75% 74% 66% 61% 72% 62% 64% 45% 57% 65% 67% 73% 64% 54% 66% 59% 61% 63% 60% 69% 67% 49% 60% 63% 47% 60% 62% 65% 68% 69% 66% 66% 74% 75% 72% 66% 71% 72% 64% 64% 61% 41% 65% 67% 67% 64% 55% 71% 58% 64% 63% 60% 59% 68% 49% 46% 71% 39% 46% 66% 69% 55% 58% 69% 69% 78% 80% 76% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A281.77370
GSM187701PAD_00233_sample 2_preparation A235.87465
GSM187704PAD_00234_sample 3_preparation A596.02178
GSM187707PAD_00331_sample 4_preparation A214.41364
GSM187710PAD_00236_sample 5_preparation A306.37270
GSM187713PAD_00237_sample 6_preparation A108.88555
GSM187716PAD_00238_sample 7_preparation A54.606439
GSM187719PAD_00239_sample 8_preparation A242.84165
GSM187722PAD_00256_sample 9_preparation A304.12869
GSM187725PAD_00257_sample 10_preparation A452.10874
GSM187728PAD_00258_sample 11_preparation A260.77266
GSM187731PAD_00259_sample 12_preparation A160.04362
GSM187734PAD_00260_sample 13_preparation A354.30473
GSM187737PAD_00261_sample 14_preparation A300.11369
GSM187740PAD_00262_sample 15_preparation A269.31468
GSM187743PAD_00263_sample 16_preparation A207.07666
GSM187746PAD_00280_sample 17_preparation A190.84662
GSM187749PAD_00281_sample 18_preparation A300.29670
GSM187752PAD_00282_sample 19_preparation A112.00753
GSM187755PAD_00283_sample 20_preparation A166.77459
GSM187758PAD_00284_sample 21_preparation A154.31361
GSM187761PAD_00285_sample 22_preparation A285.51467
GSM187764PAD_00286_sample 23_preparation A178.31563
GSM187767PAD_00287_sample 24_preparation A218.32564
GSM187770PAD_00304_sample 25_preparation A_replicate 1180.47961
GSM187771PAD_00305_sample 25_preparation A_replicate 2174.97361
GSM187772PAD_00306_sample 25_preparation A_replicate 3149.80758
GSM187780PAD_00313_sample 26_preparation A_replicate 1213.39165
GSM187781PAD_00314_sample 26_preparation A_replicate 2252.21968
GSM187782PAD_00315_sample 26_preparation A_replicate 3246.68668
GSM187788PAD_00322_sample 27_preparation A_replicate 1495.30677
GSM187789PAD_00323_sample 27_preparation A_replicate 2446.92175
GSM187790PAD_00324_sample 27_preparation A_replicate 3416.80174
GSM187699PAD_00240_sample 1_preparation B245.43666
GSM187702PAD_00241_sample 2_preparation B196.13361
GSM187705PAD_00242_sample 3_preparation B404.41872
GSM187708PAD_00243_sample 4_preparation B213.91362
GSM187711PAD_00244_sample 5_preparation B267.77264
GSM187714PAD_00245_sample 6_preparation B89.451745
GSM187717PAD_00246_sample 7_preparation B148.80457
GSM187720PAD_00247_sample 8_preparation B263.3265
GSM187723PAD_00264_sample 9_preparation B319.47867
GSM187726PAD_00340_sample 10_preparation B501.74573
GSM187729PAD_00266_sample 11_preparation B254.12564
GSM187732PAD_00267_sample 12_preparation B142.56454
GSM187735PAD_00268_sample 13_preparation B269.60766
GSM187738PAD_00269_sample 14_preparation B205.06459
GSM187741PAD_00270_sample 15_preparation B209.89261
GSM187744PAD_00271_sample 16_preparation B287.73863
GSM187747PAD_00288_sample 17_preparation B195.72560
GSM187750PAD_00289_sample 18_preparation B310.82669
GSM187753PAD_00290_sample 19_preparation B314.46967
GSM187756PAD_00291_sample 20_preparation B111.16849
GSM187759PAD_00292_sample 21_preparation B176.0660
GSM187762PAD_00293_sample 22_preparation B249.38963
GSM187765PAD_00294_sample 23_preparation B82.954647
GSM187768PAD_00295_sample 24_preparation B182.85360
GSM187773PAD_00307_sample 25_preparation B_replicate 1221.57162
GSM187774PAD_00308_sample 25_preparation B_replicate 2277.29365
GSM187775PAD_00309_sample 25_preparation B_replicate 3309.02268
GSM187776PAD_00333_sample 25_preparation B_replicate 3309.369
GSM187783PAD_00316_sample 26_preparation B_replicate 1233.966
GSM187784PAD_00317_sample 26_preparation B_replicate 2260.69366
GSM187791PAD_00325_sample 27_preparation B_replicate 1432.08174
GSM187792PAD_00326_sample 27_preparation B_replicate 2453.68275
GSM187793PAD_00327_sample 27_preparation B_replicate 3377.43972
GSM187700PAD_00248_sample 1_preparation C245.68366
GSM187703PAD_00249_sample 2_preparation C351.59971
GSM187706PAD_00250_sample 3_preparation C398.9572
GSM187709PAD_00251_sample 4_preparation C245.04164
GSM187712PAD_00252_sample 5_preparation C228.25364
GSM187715PAD_00253_sample 6_preparation C195.23861
GSM187718PAD_00254_sample 7_preparation C72.447541
GSM187721PAD_00255_sample 8_preparation C243.18365
GSM187724PAD_00272_sample 9_preparation C284.51467
GSM187727PAD_00273_sample 10_preparation C306.73367
GSM187730PAD_00274_sample 11_preparation C227.08164
GSM187733PAD_00275_sample 12_preparation C122.34155
GSM187736PAD_00276_sample 13_preparation C343.8771
GSM187739PAD_00277_sample 14_preparation C171.24258
GSM187742PAD_00278_sample 15_preparation C234.71564
GSM187745PAD_00279_sample 16_preparation C198.47663
GSM187748PAD_00296_sample 17_preparation C183.48360
GSM187751PAD_00297_sample 18_preparation C160.6859
GSM187754PAD_00298_sample 19_preparation C305.29268
GSM187757PAD_00299_sample 20_preparation C89.411649
GSM187760PAD_00300_sample 21_preparation C80.64746
GSM187763PAD_00301_sample 22_preparation C374.15571
GSM187766PAD_00302_sample 23_preparation C60.847339
GSM187769PAD_00303_sample 24_preparation C97.468846
GSM187777PAD_00310_sample 25_preparation C_replicate 1252.42266
GSM187778PAD_00311_sample 25_preparation C_replicate 2301.24169
GSM187779PAD_00332_sample 25_preparation C_replicate 3157.57455
GSM187785PAD_00320_sample 26_preparation C_replicate 1149.21558
GSM187786PAD_00321_sample 26_preparation C_replicate 2268.04969
GSM187787PAD_00319_sample 26_preparation C_replicate 3271.2169
GSM187794PAD_00328_sample 27_preparation C_replicate 1541.65578
GSM187795PAD_00329_sample 27_preparation C_replicate 2663.32180
GSM187796PAD_00330_sample 27_preparation C_replicate 3466.61476