ProfileGDS2819 / 228054_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 69% 66% 55% 78% 72% 18% 88% 76% 64% 80% 76% 43% 70% 64% 82% 65% 61% 68% 60% 62% 82% 81% 75% 75% 74% 76% 74% 56% 64% 62% 44% 38% 39% 60% 61% 54% 73% 68% 13% 84% 77% 70% 79% 75% 13% 63% 48% 79% 61% 16% 71% 33% 42% 76% 81% 75% 75% 77% 71% 76% 71% 58% 61% 21% 49% 35% 65% 61% 40% 70% 67% 7% 86% 80% 56% 80% 70% 20% 67% 64% 81% 61% 45% 72% 62% 57% 77% 78% 78% 71% 75% 72% 73% 62% 57% 63% 58% 29% 59% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A253.9769
GSM187701PAD_00233_sample 2_preparation A252.27166
GSM187704PAD_00234_sample 3_preparation A168.56355
GSM187707PAD_00331_sample 4_preparation A577.01978
GSM187710PAD_00236_sample 5_preparation A368.86872
GSM187713PAD_00237_sample 6_preparation A14.550718
GSM187716PAD_00238_sample 7_preparation A1201.4788
GSM187719PAD_00239_sample 8_preparation A442.21176
GSM187722PAD_00256_sample 9_preparation A207.84864
GSM187725PAD_00257_sample 10_preparation A698.59980
GSM187728PAD_00258_sample 11_preparation A515.10376
GSM187731PAD_00259_sample 12_preparation A69.046743
GSM187734PAD_00260_sample 13_preparation A290.52270
GSM187737PAD_00261_sample 14_preparation A228.53764
GSM187740PAD_00262_sample 15_preparation A758.12982
GSM187743PAD_00263_sample 16_preparation A180.7365
GSM187746PAD_00280_sample 17_preparation A181.45961
GSM187749PAD_00281_sample 18_preparation A255.2968
GSM187752PAD_00282_sample 19_preparation A161.80660
GSM187755PAD_00283_sample 20_preparation A191.43562
GSM187758PAD_00284_sample 21_preparation A779.7882
GSM187761PAD_00285_sample 22_preparation A744.98981
GSM187764PAD_00286_sample 23_preparation A411.48375
GSM187767PAD_00287_sample 24_preparation A491.95775
GSM187770PAD_00304_sample 25_preparation A_replicate 1426.72874
GSM187771PAD_00305_sample 25_preparation A_replicate 2473.17676
GSM187772PAD_00306_sample 25_preparation A_replicate 3409.56374
GSM187780PAD_00313_sample 26_preparation A_replicate 1130.10756
GSM187781PAD_00314_sample 26_preparation A_replicate 2187.66264
GSM187782PAD_00315_sample 26_preparation A_replicate 3166.30562
GSM187788PAD_00322_sample 27_preparation A_replicate 182.268244
GSM187789PAD_00323_sample 27_preparation A_replicate 262.951638
GSM187790PAD_00324_sample 27_preparation A_replicate 371.193139
GSM187699PAD_00240_sample 1_preparation B162.32160
GSM187702PAD_00241_sample 2_preparation B199.88661
GSM187705PAD_00242_sample 3_preparation B133.26854
GSM187708PAD_00243_sample 4_preparation B429.75873
GSM187711PAD_00244_sample 5_preparation B329.02268
GSM187714PAD_00245_sample 6_preparation B11.902313
GSM187717PAD_00246_sample 7_preparation B851.43484
GSM187720PAD_00247_sample 8_preparation B558.73377
GSM187723PAD_00264_sample 9_preparation B380.95570
GSM187726PAD_00340_sample 10_preparation B682.34279
GSM187729PAD_00266_sample 11_preparation B542.61475
GSM187732PAD_00267_sample 12_preparation B14.979413
GSM187735PAD_00268_sample 13_preparation B220.23963
GSM187738PAD_00269_sample 14_preparation B125.3348
GSM187741PAD_00270_sample 15_preparation B671.62679
GSM187744PAD_00271_sample 16_preparation B267.19661
GSM187747PAD_00288_sample 17_preparation B19.50216
GSM187750PAD_00289_sample 18_preparation B365.29371
GSM187753PAD_00290_sample 19_preparation B53.916433
GSM187756PAD_00291_sample 20_preparation B83.119642
GSM187759PAD_00292_sample 21_preparation B499.37676
GSM187762PAD_00293_sample 22_preparation B770.50981
GSM187765PAD_00294_sample 23_preparation B423.67675
GSM187768PAD_00295_sample 24_preparation B517.69975
GSM187773PAD_00307_sample 25_preparation B_replicate 1572.57977
GSM187774PAD_00308_sample 25_preparation B_replicate 2389.04571
GSM187775PAD_00309_sample 25_preparation B_replicate 3527.71976
GSM187776PAD_00333_sample 25_preparation B_replicate 3338.52671
GSM187783PAD_00316_sample 26_preparation B_replicate 1157.84158
GSM187784PAD_00317_sample 26_preparation B_replicate 2204.13461
GSM187791PAD_00325_sample 27_preparation B_replicate 123.527921
GSM187792PAD_00326_sample 27_preparation B_replicate 2108.18549
GSM187793PAD_00327_sample 27_preparation B_replicate 356.145335
GSM187700PAD_00248_sample 1_preparation C231.32865
GSM187703PAD_00249_sample 2_preparation C193.68261
GSM187706PAD_00250_sample 3_preparation C87.469640
GSM187709PAD_00251_sample 4_preparation C356.14270
GSM187712PAD_00252_sample 5_preparation C289.6167
GSM187715PAD_00253_sample 6_preparation C11.65157
GSM187718PAD_00254_sample 7_preparation C1006.8586
GSM187721PAD_00255_sample 8_preparation C693.06580
GSM187724PAD_00272_sample 9_preparation C158.95356
GSM187727PAD_00273_sample 10_preparation C743.86880
GSM187730PAD_00274_sample 11_preparation C348.39570
GSM187733PAD_00275_sample 12_preparation C17.647420
GSM187736PAD_00276_sample 13_preparation C265.63767
GSM187739PAD_00277_sample 14_preparation C237.80964
GSM187742PAD_00278_sample 15_preparation C722.59881
GSM187745PAD_00279_sample 16_preparation C173.27861
GSM187748PAD_00296_sample 17_preparation C81.235145
GSM187751PAD_00297_sample 18_preparation C389.73572
GSM187754PAD_00298_sample 19_preparation C201.70362
GSM187757PAD_00299_sample 20_preparation C132.20257
GSM187760PAD_00300_sample 21_preparation C529.76177
GSM187763PAD_00301_sample 22_preparation C605.87178
GSM187766PAD_00302_sample 23_preparation C512.1378
GSM187769PAD_00303_sample 24_preparation C360.59371
GSM187777PAD_00310_sample 25_preparation C_replicate 1476.65475
GSM187778PAD_00311_sample 25_preparation C_replicate 2380.94772
GSM187779PAD_00332_sample 25_preparation C_replicate 3395.21373
GSM187785PAD_00320_sample 26_preparation C_replicate 1183.51562
GSM187786PAD_00321_sample 26_preparation C_replicate 2144.39457
GSM187787PAD_00319_sample 26_preparation C_replicate 3195.20563
GSM187794PAD_00328_sample 27_preparation C_replicate 1148.94858
GSM187795PAD_00329_sample 27_preparation C_replicate 245.711329
GSM187796PAD_00330_sample 27_preparation C_replicate 3161.07859