ProfileGDS2819 / 226629_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 66% 70% 67% 74% 71% 75% 73% 72% 72% 71% 59% 74% 77% 79% 57% 66% 64% 78% 82% 91% 78% 69% 82% 63% 55% 56% 62% 80% 80% 80% 75% 73% 67% 52% 61% 72% 71% 59% 68% 70% 69% 73% 69% 54% 62% 71% 76% 55% 70% 46% 71% 80% 86% 74% 72% 82% 58% 65% 60% 55% 81% 81% 78% 72% 72% 76% 63% 60% 71% 73% 72% 78% 76% 71% 74% 67% 59% 66% 72% 75% 43% 69% 64% 69% 74% 85% 75% 62% 74% 60% 35% 57% 61% 78% 78% 80% 68% 74% 71% sort by protocol sort by individual sort by disease state Gene Expression Profile
Graph caption help
SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A211.20666
GSM187701PAD_00233_sample 2_preparation A322.5370
GSM187704PAD_00234_sample 3_preparation A295.07367
GSM187707PAD_00331_sample 4_preparation A416.10274
GSM187710PAD_00236_sample 5_preparation A322.51571
GSM187713PAD_00237_sample 6_preparation A398.80575
GSM187716PAD_00238_sample 7_preparation A306.40973
GSM187719PAD_00239_sample 8_preparation A359.29672
GSM187722PAD_00256_sample 9_preparation A390.82672
GSM187725PAD_00257_sample 10_preparation A353.64671
GSM187728PAD_00258_sample 11_preparation A168.43559
GSM187731PAD_00259_sample 12_preparation A393.61374
GSM187734PAD_00260_sample 13_preparation A490.63277
GSM187737PAD_00261_sample 14_preparation A616.28479
GSM187740PAD_00262_sample 15_preparation A134.27357
GSM187743PAD_00263_sample 16_preparation A201.29866
GSM187746PAD_00280_sample 17_preparation A218.51164
GSM187749PAD_00281_sample 18_preparation A537.13678
GSM187752PAD_00282_sample 19_preparation A836.1782
GSM187755PAD_00283_sample 20_preparation A1936.5991
GSM187758PAD_00284_sample 21_preparation A558.00678
GSM187761PAD_00285_sample 22_preparation A318.42969
GSM187764PAD_00286_sample 23_preparation A721.70382
GSM187767PAD_00287_sample 24_preparation A202.13463
GSM187770PAD_00304_sample 25_preparation A_replicate 1137.38755
GSM187771PAD_00305_sample 25_preparation A_replicate 2142.82856
GSM187772PAD_00306_sample 25_preparation A_replicate 3190.44762
GSM187780PAD_00313_sample 26_preparation A_replicate 1621.74880
GSM187781PAD_00314_sample 26_preparation A_replicate 2609.8780
GSM187782PAD_00315_sample 26_preparation A_replicate 3588.97280
GSM187788PAD_00322_sample 27_preparation A_replicate 1436.29175
GSM187789PAD_00323_sample 27_preparation A_replicate 2363.20573
GSM187790PAD_00324_sample 27_preparation A_replicate 3242.61867
GSM187699PAD_00240_sample 1_preparation B111.56752
GSM187702PAD_00241_sample 2_preparation B201.47261
GSM187705PAD_00242_sample 3_preparation B408.88772
GSM187708PAD_00243_sample 4_preparation B387.23971
GSM187711PAD_00244_sample 5_preparation B190.33159
GSM187714PAD_00245_sample 6_preparation B280.23268
GSM187717PAD_00246_sample 7_preparation B290.32570
GSM187720PAD_00247_sample 8_preparation B318.84769
GSM187723PAD_00264_sample 9_preparation B453.22273
GSM187726PAD_00340_sample 10_preparation B411.4369
GSM187729PAD_00266_sample 11_preparation B144.53654
GSM187732PAD_00267_sample 12_preparation B216.13662
GSM187735PAD_00268_sample 13_preparation B378.09471
GSM187738PAD_00269_sample 14_preparation B539.57976
GSM187741PAD_00270_sample 15_preparation B152.955
GSM187744PAD_00271_sample 16_preparation B409.77570
GSM187747PAD_00288_sample 17_preparation B110.10946
GSM187750PAD_00289_sample 18_preparation B375.50671
GSM187753PAD_00290_sample 19_preparation B719.36580
GSM187756PAD_00291_sample 20_preparation B1030.1986
GSM187759PAD_00292_sample 21_preparation B434.77874
GSM187762PAD_00293_sample 22_preparation B435.51372
GSM187765PAD_00294_sample 23_preparation B762.92882
GSM187768PAD_00295_sample 24_preparation B159.72558
GSM187773PAD_00307_sample 25_preparation B_replicate 1272.91265
GSM187774PAD_00308_sample 25_preparation B_replicate 2215.25760
GSM187775PAD_00309_sample 25_preparation B_replicate 3153.49555
GSM187776PAD_00333_sample 25_preparation B_replicate 3688.6781
GSM187783PAD_00316_sample 26_preparation B_replicate 1650.26481
GSM187784PAD_00317_sample 26_preparation B_replicate 2557.57478
GSM187791PAD_00325_sample 27_preparation B_replicate 1374.15272
GSM187792PAD_00326_sample 27_preparation B_replicate 2370.27972
GSM187793PAD_00327_sample 27_preparation B_replicate 3491.2876
GSM187700PAD_00248_sample 1_preparation C212.50363
GSM187703PAD_00249_sample 2_preparation C177.72860
GSM187706PAD_00250_sample 3_preparation C371.23571
GSM187709PAD_00251_sample 4_preparation C410.50373
GSM187712PAD_00252_sample 5_preparation C396.49772
GSM187715PAD_00253_sample 6_preparation C550.44278
GSM187718PAD_00254_sample 7_preparation C421.73776
GSM187721PAD_00255_sample 8_preparation C344.76171
GSM187724PAD_00272_sample 9_preparation C471.67174
GSM187727PAD_00273_sample 10_preparation C300.1667
GSM187730PAD_00274_sample 11_preparation C170.54659
GSM187733PAD_00275_sample 12_preparation C238.42666
GSM187736PAD_00276_sample 13_preparation C368.74172
GSM187739PAD_00277_sample 14_preparation C467.88475
GSM187742PAD_00278_sample 15_preparation C82.339143
GSM187745PAD_00279_sample 16_preparation C306.5269
GSM187748PAD_00296_sample 17_preparation C227.46964
GSM187751PAD_00297_sample 18_preparation C321.21869
GSM187754PAD_00298_sample 19_preparation C456.9174
GSM187757PAD_00299_sample 20_preparation C976.73285
GSM187760PAD_00300_sample 21_preparation C457.48775
GSM187763PAD_00301_sample 22_preparation C212.25862
GSM187766PAD_00302_sample 23_preparation C381.56174
GSM187769PAD_00303_sample 24_preparation C183.39960
GSM187777PAD_00310_sample 25_preparation C_replicate 153.496135
GSM187778PAD_00311_sample 25_preparation C_replicate 2148.31557
GSM187779PAD_00332_sample 25_preparation C_replicate 3201.88761
GSM187785PAD_00320_sample 26_preparation C_replicate 1496.11378
GSM187786PAD_00321_sample 26_preparation C_replicate 2511.66878
GSM187787PAD_00319_sample 26_preparation C_replicate 3605.90980
GSM187794PAD_00328_sample 27_preparation C_replicate 1272.14568
GSM187795PAD_00329_sample 27_preparation C_replicate 2425.77674
GSM187796PAD_00330_sample 27_preparation C_replicate 3326.72471