ProfileGDS2819 / 220188_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 4% 45% 39% 36% 27% 45% 51% 41% 39% 49% 39% 33% 5% 39% 21% 46% 28% 55% 46% 45% 49% 52% 18% 39% 41% 39% 12% 42% 33% 39% 27% 26% 52% 6% 44% 26% 34% 35% 44% 47% 3% 2% 52% 20% 4% 12% 38% 31% 38% 39% 24% 20% 31% 30% 37% 42% 26% 52% 11% 12% 16% 34% 15% 33% 18% 6% 42% 26% 5% 13% 46% 28% 2% 34% 22% 6% 46% 40% 45% 33% 3% 6% 18% 6% 45% 5% 29% 1% 29% 20% 16% 45% 35% 25% 2% 36% 36% 17% 47% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A8.976834
GSM187701PAD_00233_sample 2_preparation A99.547145
GSM187704PAD_00234_sample 3_preparation A86.556239
GSM187707PAD_00331_sample 4_preparation A57.149136
GSM187710PAD_00236_sample 5_preparation A25.362127
GSM187713PAD_00237_sample 6_preparation A71.263745
GSM187716PAD_00238_sample 7_preparation A90.172951
GSM187719PAD_00239_sample 8_preparation A94.099241
GSM187722PAD_00256_sample 9_preparation A59.004239
GSM187725PAD_00257_sample 10_preparation A100.68349
GSM187728PAD_00258_sample 11_preparation A63.43139
GSM187731PAD_00259_sample 12_preparation A44.085333
GSM187734PAD_00260_sample 13_preparation A8.207575
GSM187737PAD_00261_sample 14_preparation A77.156339
GSM187740PAD_00262_sample 15_preparation A19.250521
GSM187743PAD_00263_sample 16_preparation A62.396946
GSM187746PAD_00280_sample 17_preparation A35.698528
GSM187749PAD_00281_sample 18_preparation A125.74555
GSM187752PAD_00282_sample 19_preparation A82.898346
GSM187755PAD_00283_sample 20_preparation A95.138145
GSM187758PAD_00284_sample 21_preparation A82.61849
GSM187761PAD_00285_sample 22_preparation A122.62252
GSM187764PAD_00286_sample 23_preparation A18.517518
GSM187767PAD_00287_sample 24_preparation A55.906339
GSM187770PAD_00304_sample 25_preparation A_replicate 173.736641
GSM187771PAD_00305_sample 25_preparation A_replicate 267.839439
GSM187772PAD_00306_sample 25_preparation A_replicate 311.835512
GSM187780PAD_00313_sample 26_preparation A_replicate 172.199342
GSM187781PAD_00314_sample 26_preparation A_replicate 247.82933
GSM187782PAD_00315_sample 26_preparation A_replicate 355.522339
GSM187788PAD_00322_sample 27_preparation A_replicate 134.280427
GSM187789PAD_00323_sample 27_preparation A_replicate 232.770226
GSM187790PAD_00324_sample 27_preparation A_replicate 3118.23152
GSM187699PAD_00240_sample 1_preparation B6.259366
GSM187702PAD_00241_sample 2_preparation B85.263544
GSM187705PAD_00242_sample 3_preparation B33.83426
GSM187708PAD_00243_sample 4_preparation B54.90434
GSM187711PAD_00244_sample 5_preparation B54.643635
GSM187714PAD_00245_sample 6_preparation B84.464444
GSM187717PAD_00246_sample 7_preparation B95.236347
GSM187720PAD_00247_sample 8_preparation B7.939193
GSM187723PAD_00264_sample 9_preparation B5.767922
GSM187726PAD_00340_sample 10_preparation B202.42452
GSM187729PAD_00266_sample 11_preparation B21.229720
GSM187732PAD_00267_sample 12_preparation B7.539094
GSM187735PAD_00268_sample 13_preparation B11.985612
GSM187738PAD_00269_sample 14_preparation B83.898938
GSM187741PAD_00270_sample 15_preparation B51.386231
GSM187744PAD_00271_sample 16_preparation B104.0938
GSM187747PAD_00288_sample 17_preparation B81.263639
GSM187750PAD_00289_sample 18_preparation B28.084424
GSM187753PAD_00290_sample 19_preparation B21.184220
GSM187756PAD_00291_sample 20_preparation B48.157231
GSM187759PAD_00292_sample 21_preparation B45.953130
GSM187762PAD_00293_sample 22_preparation B71.930937
GSM187765PAD_00294_sample 23_preparation B69.176242
GSM187768PAD_00295_sample 24_preparation B31.065526
GSM187773PAD_00307_sample 25_preparation B_replicate 1136.852
GSM187774PAD_00308_sample 25_preparation B_replicate 215.498711
GSM187775PAD_00309_sample 25_preparation B_replicate 312.457412
GSM187776PAD_00333_sample 25_preparation B_replicate 321.232116
GSM187783PAD_00316_sample 26_preparation B_replicate 156.211134
GSM187784PAD_00317_sample 26_preparation B_replicate 217.2615
GSM187791PAD_00325_sample 27_preparation B_replicate 153.259133
GSM187792PAD_00326_sample 27_preparation B_replicate 219.178718
GSM187793PAD_00327_sample 27_preparation B_replicate 37.134376
GSM187700PAD_00248_sample 1_preparation C82.281142
GSM187703PAD_00249_sample 2_preparation C33.129226
GSM187706PAD_00250_sample 3_preparation C9.761465
GSM187709PAD_00251_sample 4_preparation C17.217313
GSM187712PAD_00252_sample 5_preparation C87.798346
GSM187715PAD_00253_sample 6_preparation C42.547528
GSM187718PAD_00254_sample 7_preparation C4.217972
GSM187721PAD_00255_sample 8_preparation C56.540534
GSM187724PAD_00272_sample 9_preparation C26.336422
GSM187727PAD_00273_sample 10_preparation C5.980376
GSM187730PAD_00274_sample 11_preparation C82.646146
GSM187733PAD_00275_sample 12_preparation C61.573640
GSM187736PAD_00276_sample 13_preparation C84.157645
GSM187739PAD_00277_sample 14_preparation C56.618933
GSM187742PAD_00278_sample 15_preparation C5.178993
GSM187745PAD_00279_sample 16_preparation C5.652116
GSM187748PAD_00296_sample 17_preparation C18.05518
GSM187751PAD_00297_sample 18_preparation C4.776766
GSM187754PAD_00298_sample 19_preparation C82.627245
GSM187757PAD_00299_sample 20_preparation C4.699475
GSM187760PAD_00300_sample 21_preparation C37.520229
GSM187763PAD_00301_sample 22_preparation C3.680291
GSM187766PAD_00302_sample 23_preparation C36.339529
GSM187769PAD_00303_sample 24_preparation C22.347820
GSM187777PAD_00310_sample 25_preparation C_replicate 116.011816
GSM187778PAD_00311_sample 25_preparation C_replicate 289.331645
GSM187779PAD_00332_sample 25_preparation C_replicate 368.970835
GSM187785PAD_00320_sample 26_preparation C_replicate 131.106425
GSM187786PAD_00321_sample 26_preparation C_replicate 25.311632
GSM187787PAD_00319_sample 26_preparation C_replicate 357.111736
GSM187794PAD_00328_sample 27_preparation C_replicate 156.186736
GSM187795PAD_00329_sample 27_preparation C_replicate 219.934317
GSM187796PAD_00330_sample 27_preparation C_replicate 391.745947