ProfileGDS2819 / 214091_s_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 12% 63% 42% 37% 41% 61% 49% 60% 53% 58% 52% 61% 57% 57% 42% 54% 57% 42% 36% 71% 35% 40% 63% 42% 42% 46% 28% 57% 53% 53% 51% 37% 54% 62% 52% 26% 32% 55% 63% 53% 56% 44% 66% 36% 57% 53% 49% 48% 32% 56% 59% 61% 62% 24% 48% 54% 46% 46% 36% 31% 64% 66% 63% 53% 48% 32% 57% 57% 62% 18% 50% 66% 51% 50% 52% 28% 40% 47% 62% 51% 50% 38% 51% 44% 43% 60% 52% 45% 42% 54% 51% 60% 61% 56% 32% 61% 57% 56% 50% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A14.696712
GSM187701PAD_00233_sample 2_preparation A211.86563
GSM187704PAD_00234_sample 3_preparation A99.06842
GSM187707PAD_00331_sample 4_preparation A61.900137
GSM187710PAD_00236_sample 5_preparation A54.580841
GSM187713PAD_00237_sample 6_preparation A152.99761
GSM187716PAD_00238_sample 7_preparation A83.817749
GSM187719PAD_00239_sample 8_preparation A200.58960
GSM187722PAD_00256_sample 9_preparation A107.83753
GSM187725PAD_00257_sample 10_preparation A152.43358
GSM187728PAD_00258_sample 11_preparation A114.54252
GSM187731PAD_00259_sample 12_preparation A156.93661
GSM187734PAD_00260_sample 13_preparation A146.41357
GSM187737PAD_00261_sample 14_preparation A157.31757
GSM187740PAD_00262_sample 15_preparation A66.798342
GSM187743PAD_00263_sample 16_preparation A94.526454
GSM187746PAD_00280_sample 17_preparation A146.99157
GSM187749PAD_00281_sample 18_preparation A71.796842
GSM187752PAD_00282_sample 19_preparation A53.918636
GSM187755PAD_00283_sample 20_preparation A313.10371
GSM187758PAD_00284_sample 21_preparation A43.989835
GSM187761PAD_00285_sample 22_preparation A72.725740
GSM187764PAD_00286_sample 23_preparation A176.39563
GSM187767PAD_00287_sample 24_preparation A65.531742
GSM187770PAD_00304_sample 25_preparation A_replicate 176.880842
GSM187771PAD_00305_sample 25_preparation A_replicate 291.624346
GSM187772PAD_00306_sample 25_preparation A_replicate 335.966828
GSM187780PAD_00313_sample 26_preparation A_replicate 1133.74657
GSM187781PAD_00314_sample 26_preparation A_replicate 2112.85453
GSM187782PAD_00315_sample 26_preparation A_replicate 3102.31653
GSM187788PAD_00322_sample 27_preparation A_replicate 1108.04851
GSM187789PAD_00323_sample 27_preparation A_replicate 260.681237
GSM187790PAD_00324_sample 27_preparation A_replicate 3129.95454
GSM187699PAD_00240_sample 1_preparation B187.46462
GSM187702PAD_00241_sample 2_preparation B121.92252
GSM187705PAD_00242_sample 3_preparation B34.063726
GSM187708PAD_00243_sample 4_preparation B50.091232
GSM187711PAD_00244_sample 5_preparation B146.58155
GSM187714PAD_00245_sample 6_preparation B208.36963
GSM187717PAD_00246_sample 7_preparation B121.4153
GSM187720PAD_00247_sample 8_preparation B172.34456
GSM187723PAD_00264_sample 9_preparation B110.57444
GSM187726PAD_00340_sample 10_preparation B365.7166
GSM187729PAD_00266_sample 11_preparation B59.365136
GSM187732PAD_00267_sample 12_preparation B166.10457
GSM187735PAD_00268_sample 13_preparation B127.08553
GSM187738PAD_00269_sample 14_preparation B133.41149
GSM187741PAD_00270_sample 15_preparation B111.35948
GSM187744PAD_00271_sample 16_preparation B75.886732
GSM187747PAD_00288_sample 17_preparation B165.94856
GSM187750PAD_00289_sample 18_preparation B167.64459
GSM187753PAD_00290_sample 19_preparation B204.4261
GSM187756PAD_00291_sample 20_preparation B195.02162
GSM187759PAD_00292_sample 21_preparation B29.300624
GSM187762PAD_00293_sample 22_preparation B117.25848
GSM187765PAD_00294_sample 23_preparation B117.65654
GSM187768PAD_00295_sample 24_preparation B87.176746
GSM187773PAD_00307_sample 25_preparation B_replicate 1107.43446
GSM187774PAD_00308_sample 25_preparation B_replicate 275.470536
GSM187775PAD_00309_sample 25_preparation B_replicate 350.611931
GSM187776PAD_00333_sample 25_preparation B_replicate 3239.36564
GSM187783PAD_00316_sample 26_preparation B_replicate 1240.83566
GSM187784PAD_00317_sample 26_preparation B_replicate 2217.96263
GSM187791PAD_00325_sample 27_preparation B_replicate 1129.44153
GSM187792PAD_00326_sample 27_preparation B_replicate 2102.81648
GSM187793PAD_00327_sample 27_preparation B_replicate 347.481832
GSM187700PAD_00248_sample 1_preparation C156.47657
GSM187703PAD_00249_sample 2_preparation C151.49857
GSM187706PAD_00250_sample 3_preparation C232.52162
GSM187709PAD_00251_sample 4_preparation C23.648418
GSM187712PAD_00252_sample 5_preparation C105.02150
GSM187715PAD_00253_sample 6_preparation C257.25466
GSM187718PAD_00254_sample 7_preparation C108.89451
GSM187721PAD_00255_sample 8_preparation C120.30850
GSM187724PAD_00272_sample 9_preparation C128.44552
GSM187727PAD_00273_sample 10_preparation C35.209428
GSM187730PAD_00274_sample 11_preparation C62.931640
GSM187733PAD_00275_sample 12_preparation C81.573947
GSM187736PAD_00276_sample 13_preparation C189.31862
GSM187739PAD_00277_sample 14_preparation C128.70951
GSM187742PAD_00278_sample 15_preparation C108.94950
GSM187745PAD_00279_sample 16_preparation C55.265638
GSM187748PAD_00296_sample 17_preparation C111.99951
GSM187751PAD_00297_sample 18_preparation C71.431644
GSM187754PAD_00298_sample 19_preparation C76.63443
GSM187757PAD_00299_sample 20_preparation C154.64360
GSM187760PAD_00300_sample 21_preparation C107.91952
GSM187763PAD_00301_sample 22_preparation C92.585445
GSM187766PAD_00302_sample 23_preparation C70.214242
GSM187769PAD_00303_sample 24_preparation C136.41154
GSM187777PAD_00310_sample 25_preparation C_replicate 1114.40351
GSM187778PAD_00311_sample 25_preparation C_replicate 2181.16760
GSM187779PAD_00332_sample 25_preparation C_replicate 3205.71361
GSM187785PAD_00320_sample 26_preparation C_replicate 1141.39756
GSM187786PAD_00321_sample 26_preparation C_replicate 247.806632
GSM187787PAD_00319_sample 26_preparation C_replicate 3170.2761
GSM187794PAD_00328_sample 27_preparation C_replicate 1140.81957
GSM187795PAD_00329_sample 27_preparation C_replicate 2158.65656
GSM187796PAD_00330_sample 27_preparation C_replicate 3105.05150