ProfileGDS2819 / 212844_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 82% 77% 83% 78% 40% 87% 86% 65% 76% 73% 62% 82% 84% 73% 70% 71% 85% 71% 79% 72% 83% 79% 86% 61% 78% 80% 81% 59% 58% 74% 80% 83% 79% 82% 81% 77% 80% 49% 89% 83% 79% 77% 79% 54% 84% 82% 74% 71% 74% 84% 72% 78% 76% 87% 78% 84% 43% 81% 81% 80% 78% 75% 63% 83% 81% 81% 80% 76% 81% 83% 31% 89% 84% 83% 74% 70% 58% 81% 80% 70% 72% 71% 85% 71% 76% 79% 82% 74% 85% 65% 82% 84% 78% 51% 73% 70% 81% 80% 80% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A680.98382
GSM187701PAD_00233_sample 2_preparation A487.24977
GSM187704PAD_00234_sample 3_preparation A847.50983
GSM187707PAD_00331_sample 4_preparation A546.81578
GSM187710PAD_00236_sample 5_preparation A50.545940
GSM187713PAD_00237_sample 6_preparation A1106.0787
GSM187716PAD_00238_sample 7_preparation A979.8686
GSM187719PAD_00239_sample 8_preparation A244.87265
GSM187722PAD_00256_sample 9_preparation A493.77376
GSM187725PAD_00257_sample 10_preparation A406.6273
GSM187728PAD_00258_sample 11_preparation A205.66262
GSM187731PAD_00259_sample 12_preparation A704.79582
GSM187734PAD_00260_sample 13_preparation A825.00184
GSM187737PAD_00261_sample 14_preparation A390.10373
GSM187740PAD_00262_sample 15_preparation A318.04770
GSM187743PAD_00263_sample 16_preparation A311.1271
GSM187746PAD_00280_sample 17_preparation A1090.0185
GSM187749PAD_00281_sample 18_preparation A320.05871
GSM187752PAD_00282_sample 19_preparation A615.22779
GSM187755PAD_00283_sample 20_preparation A331.0572
GSM187758PAD_00284_sample 21_preparation A813.57683
GSM187761PAD_00285_sample 22_preparation A638.15679
GSM187764PAD_00286_sample 23_preparation A1006.0786
GSM187767PAD_00287_sample 24_preparation A178.72461
GSM187770PAD_00304_sample 25_preparation A_replicate 1566.53478
GSM187771PAD_00305_sample 25_preparation A_replicate 2687.50680
GSM187772PAD_00306_sample 25_preparation A_replicate 3729.26181
GSM187780PAD_00313_sample 26_preparation A_replicate 1149.13659
GSM187781PAD_00314_sample 26_preparation A_replicate 2140.35758
GSM187782PAD_00315_sample 26_preparation A_replicate 3366.50274
GSM187788PAD_00322_sample 27_preparation A_replicate 1620.68280
GSM187789PAD_00323_sample 27_preparation A_replicate 2788.39883
GSM187790PAD_00324_sample 27_preparation A_replicate 3598.6479
GSM187699PAD_00240_sample 1_preparation B816.28282
GSM187702PAD_00241_sample 2_preparation B748.75781
GSM187705PAD_00242_sample 3_preparation B594.73377
GSM187708PAD_00243_sample 4_preparation B721.06380
GSM187711PAD_00244_sample 5_preparation B103.25749
GSM187714PAD_00245_sample 6_preparation B1421.4189
GSM187717PAD_00246_sample 7_preparation B774.04783
GSM187720PAD_00247_sample 8_preparation B614.21579
GSM187723PAD_00264_sample 9_preparation B600.36677
GSM187726PAD_00340_sample 10_preparation B682.28879
GSM187729PAD_00266_sample 11_preparation B146.5954
GSM187732PAD_00267_sample 12_preparation B914.46884
GSM187735PAD_00268_sample 13_preparation B792.04882
GSM187738PAD_00269_sample 14_preparation B458.19374
GSM187741PAD_00270_sample 15_preparation B382.4971
GSM187744PAD_00271_sample 16_preparation B493.87474
GSM187747PAD_00288_sample 17_preparation B977.99884
GSM187750PAD_00289_sample 18_preparation B400.2272
GSM187753PAD_00290_sample 19_preparation B627.86678
GSM187756PAD_00291_sample 20_preparation B447.84576
GSM187759PAD_00292_sample 21_preparation B1205.0287
GSM187762PAD_00293_sample 22_preparation B652.28378
GSM187765PAD_00294_sample 23_preparation B881.77384
GSM187768PAD_00295_sample 24_preparation B75.258743
GSM187773PAD_00307_sample 25_preparation B_replicate 1761.77881
GSM187774PAD_00308_sample 25_preparation B_replicate 2758.23881
GSM187775PAD_00309_sample 25_preparation B_replicate 3696.32780
GSM187776PAD_00333_sample 25_preparation B_replicate 3540.33378
GSM187783PAD_00316_sample 26_preparation B_replicate 1420.35775
GSM187784PAD_00317_sample 26_preparation B_replicate 2227.61363
GSM187791PAD_00325_sample 27_preparation B_replicate 1844.57683
GSM187792PAD_00326_sample 27_preparation B_replicate 2742.11281
GSM187793PAD_00327_sample 27_preparation B_replicate 3734.01881
GSM187700PAD_00248_sample 1_preparation C643.64880
GSM187703PAD_00249_sample 2_preparation C500.24876
GSM187706PAD_00250_sample 3_preparation C763.97581
GSM187709PAD_00251_sample 4_preparation C871.7983
GSM187712PAD_00252_sample 5_preparation C42.413931
GSM187715PAD_00253_sample 6_preparation C1389.9389
GSM187718PAD_00254_sample 7_preparation C802.44184
GSM187721PAD_00255_sample 8_preparation C846.42583
GSM187724PAD_00272_sample 9_preparation C450.7274
GSM187727PAD_00273_sample 10_preparation C354.06170
GSM187730PAD_00274_sample 11_preparation C161.46358
GSM187733PAD_00275_sample 12_preparation C734.52281
GSM187736PAD_00276_sample 13_preparation C686.60480
GSM187739PAD_00277_sample 14_preparation C339.94370
GSM187742PAD_00278_sample 15_preparation C392.00472
GSM187745PAD_00279_sample 16_preparation C372.08471
GSM187748PAD_00296_sample 17_preparation C1019.4885
GSM187751PAD_00297_sample 18_preparation C365.07871
GSM187754PAD_00298_sample 19_preparation C506.34176
GSM187757PAD_00299_sample 20_preparation C553.77979
GSM187760PAD_00300_sample 21_preparation C778.9982
GSM187763PAD_00301_sample 22_preparation C461.75874
GSM187766PAD_00302_sample 23_preparation C981.26785
GSM187769PAD_00303_sample 24_preparation C248.60765
GSM187777PAD_00310_sample 25_preparation C_replicate 1770.96282
GSM187778PAD_00311_sample 25_preparation C_replicate 2918.26184
GSM187779PAD_00332_sample 25_preparation C_replicate 3569.04478
GSM187785PAD_00320_sample 26_preparation C_replicate 1114.62351
GSM187786PAD_00321_sample 26_preparation C_replicate 2353.34873
GSM187787PAD_00319_sample 26_preparation C_replicate 3285.83770
GSM187794PAD_00328_sample 27_preparation C_replicate 1699.90681
GSM187795PAD_00329_sample 27_preparation C_replicate 2640.05780
GSM187796PAD_00330_sample 27_preparation C_replicate 3637.41580