ProfileGDS2819 / 210408_s_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 18% 15% 11% 23% 14% 9% 10% 13% 5% 13% 35% 14% 15% 21% 20% 8% 15% 10% 8% 18% 12% 7% 12% 17% 11% 13% 13% 11% 13% 20% 27% 17% 21% 19% 7% 18% 12% 11% 10% 14% 12% 14% 11% 8% 14% 30% 12% 14% 8% 12% 12% 25% 5% 13% 10% 8% 16% 41% 20% 23% 19% 15% 15% 21% 20% 15% 7% 34% 14% 21% 9% 14% 10% 10% 21% 8% 8% 26% 9% 14% 13% 7% 31% 10% 23% 12% 8% 7% 23% 15% 14% 18% 22% 9% 18% 14% 14% 18% 10% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A20.481118
GSM187701PAD_00233_sample 2_preparation A21.02415
GSM187704PAD_00234_sample 3_preparation A19.015311
GSM187707PAD_00331_sample 4_preparation A27.095523
GSM187710PAD_00236_sample 5_preparation A9.4651814
GSM187713PAD_00237_sample 6_preparation A7.272269
GSM187716PAD_00238_sample 7_preparation A7.9582710
GSM187719PAD_00239_sample 8_preparation A22.585913
GSM187722PAD_00256_sample 9_preparation A5.221085
GSM187725PAD_00257_sample 10_preparation A12.157313
GSM187728PAD_00258_sample 11_preparation A52.145635
GSM187731PAD_00259_sample 12_preparation A12.83214
GSM187734PAD_00260_sample 13_preparation A17.492815
GSM187737PAD_00261_sample 14_preparation A27.239721
GSM187740PAD_00262_sample 15_preparation A18.032620
GSM187743PAD_00263_sample 16_preparation A5.697548
GSM187746PAD_00280_sample 17_preparation A14.71915
GSM187749PAD_00281_sample 18_preparation A9.9855310
GSM187752PAD_00282_sample 19_preparation A8.864778
GSM187755PAD_00283_sample 20_preparation A21.506618
GSM187758PAD_00284_sample 21_preparation A9.8658612
GSM187761PAD_00285_sample 22_preparation A8.458487
GSM187764PAD_00286_sample 23_preparation A12.451312
GSM187767PAD_00287_sample 24_preparation A13.767317
GSM187770PAD_00304_sample 25_preparation A_replicate 111.372311
GSM187771PAD_00305_sample 25_preparation A_replicate 213.96913
GSM187772PAD_00306_sample 25_preparation A_replicate 312.234313
GSM187780PAD_00313_sample 26_preparation A_replicate 111.537111
GSM187781PAD_00314_sample 26_preparation A_replicate 213.755913
GSM187782PAD_00315_sample 26_preparation A_replicate 318.100720
GSM187788PAD_00322_sample 27_preparation A_replicate 134.24227
GSM187789PAD_00323_sample 27_preparation A_replicate 217.325717
GSM187790PAD_00324_sample 27_preparation A_replicate 324.2621
GSM187699PAD_00240_sample 1_preparation B17.12719
GSM187702PAD_00241_sample 2_preparation B6.389977
GSM187705PAD_00242_sample 3_preparation B16.252718
GSM187708PAD_00243_sample 4_preparation B11.219612
GSM187711PAD_00244_sample 5_preparation B9.2855311
GSM187714PAD_00245_sample 6_preparation B9.3709110
GSM187717PAD_00246_sample 7_preparation B13.492714
GSM187720PAD_00247_sample 8_preparation B16.769812
GSM187723PAD_00264_sample 9_preparation B20.186314
GSM187726PAD_00340_sample 10_preparation B28.921511
GSM187729PAD_00266_sample 11_preparation B6.927868
GSM187732PAD_00267_sample 12_preparation B16.870914
GSM187735PAD_00268_sample 13_preparation B44.505730
GSM187738PAD_00269_sample 14_preparation B17.125812
GSM187741PAD_00270_sample 15_preparation B15.22214
GSM187744PAD_00271_sample 16_preparation B18.12538
GSM187747PAD_00288_sample 17_preparation B15.257312
GSM187750PAD_00289_sample 18_preparation B11.419412
GSM187753PAD_00290_sample 19_preparation B31.999625
GSM187756PAD_00291_sample 20_preparation B8.130725
GSM187759PAD_00292_sample 21_preparation B13.986413
GSM187762PAD_00293_sample 22_preparation B11.527710
GSM187765PAD_00294_sample 23_preparation B7.503788
GSM187768PAD_00295_sample 24_preparation B14.835116
GSM187773PAD_00307_sample 25_preparation B_replicate 188.246441
GSM187774PAD_00308_sample 25_preparation B_replicate 229.096820
GSM187775PAD_00309_sample 25_preparation B_replicate 328.430223
GSM187776PAD_00333_sample 25_preparation B_replicate 324.43519
GSM187783PAD_00316_sample 26_preparation B_replicate 116.478615
GSM187784PAD_00317_sample 26_preparation B_replicate 217.939515
GSM187791PAD_00325_sample 27_preparation B_replicate 123.041821
GSM187792PAD_00326_sample 27_preparation B_replicate 221.99320
GSM187793PAD_00327_sample 27_preparation B_replicate 314.211115
GSM187700PAD_00248_sample 1_preparation C10.61787
GSM187703PAD_00249_sample 2_preparation C50.084634
GSM187706PAD_00250_sample 3_preparation C18.657914
GSM187709PAD_00251_sample 4_preparation C27.462521
GSM187712PAD_00252_sample 5_preparation C9.505569
GSM187715PAD_00253_sample 6_preparation C19.353314
GSM187718PAD_00254_sample 7_preparation C10.989310
GSM187721PAD_00255_sample 8_preparation C12.355110
GSM187724PAD_00272_sample 9_preparation C24.60521
GSM187727PAD_00273_sample 10_preparation C7.15668
GSM187730PAD_00274_sample 11_preparation C6.160788
GSM187733PAD_00275_sample 12_preparation C27.01226
GSM187736PAD_00276_sample 13_preparation C8.742719
GSM187739PAD_00277_sample 14_preparation C16.047314
GSM187742PAD_00278_sample 15_preparation C13.474113
GSM187745PAD_00279_sample 16_preparation C6.016977
GSM187748PAD_00296_sample 17_preparation C41.782431
GSM187751PAD_00297_sample 18_preparation C7.0525810
GSM187754PAD_00298_sample 19_preparation C24.204523
GSM187757PAD_00299_sample 20_preparation C8.8516812
GSM187760PAD_00300_sample 21_preparation C7.928838
GSM187763PAD_00301_sample 22_preparation C8.413337
GSM187766PAD_00302_sample 23_preparation C23.403723
GSM187769PAD_00303_sample 24_preparation C15.334415
GSM187777PAD_00310_sample 25_preparation C_replicate 113.684314
GSM187778PAD_00311_sample 25_preparation C_replicate 218.818218
GSM187779PAD_00332_sample 25_preparation C_replicate 332.134122
GSM187785PAD_00320_sample 26_preparation C_replicate 110.54769
GSM187786PAD_00321_sample 26_preparation C_replicate 219.064818
GSM187787PAD_00319_sample 26_preparation C_replicate 314.409514
GSM187794PAD_00328_sample 27_preparation C_replicate 113.457114
GSM187795PAD_00329_sample 27_preparation C_replicate 220.546118
GSM187796PAD_00330_sample 27_preparation C_replicate 39.8595710