ProfileGDS2819 / 209109_s_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 43% 10% 52% 44% 10% 25% 21% 18% 29% 11% 10% 6% 46% 46% 6% 18% 18% 75% 11% 11% 60% 12% 10% 11% 35% 12% 19% 19% 35% 9% 11% 44% 13% 4% 33% 66% 12% 2% 20% 16% 36% 6% 12% 17% 8% 43% 34% 13% 4% 48% 74% 47% 33% 8% 15% 43% 27% 4% 33% 14% 7% 13% 50% 23% 18% 19% 11% 31% 63% 8% 31% 43% 37% 9% 38% 28% 22% 6% 10% 15% 8% 7% 42% 79% 10% 39% 36% 6% 22% 20% 6% 14% 47% 10% 20% 39% 21% 37% 24% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A79.056543
GSM187701PAD_00233_sample 2_preparation A15.861410
GSM187704PAD_00234_sample 3_preparation A152.57952
GSM187707PAD_00331_sample 4_preparation A84.795644
GSM187710PAD_00236_sample 5_preparation A6.7885210
GSM187713PAD_00237_sample 6_preparation A23.864725
GSM187716PAD_00238_sample 7_preparation A18.144921
GSM187719PAD_00239_sample 8_preparation A28.752818
GSM187722PAD_00256_sample 9_preparation A36.517929
GSM187725PAD_00257_sample 10_preparation A9.8819211
GSM187728PAD_00258_sample 11_preparation A8.1164410
GSM187731PAD_00259_sample 12_preparation A7.014146
GSM187734PAD_00260_sample 13_preparation A92.807446
GSM187737PAD_00261_sample 14_preparation A100.48446
GSM187740PAD_00262_sample 15_preparation A5.600756
GSM187743PAD_00263_sample 16_preparation A11.524518
GSM187746PAD_00280_sample 17_preparation A17.791718
GSM187749PAD_00281_sample 18_preparation A446.95775
GSM187752PAD_00282_sample 19_preparation A10.997211
GSM187755PAD_00283_sample 20_preparation A14.06811
GSM187758PAD_00284_sample 21_preparation A141.03860
GSM187761PAD_00285_sample 22_preparation A11.977412
GSM187764PAD_00286_sample 23_preparation A10.447910
GSM187767PAD_00287_sample 24_preparation A8.7077211
GSM187770PAD_00304_sample 25_preparation A_replicate 154.993235
GSM187771PAD_00305_sample 25_preparation A_replicate 212.366512
GSM187772PAD_00306_sample 25_preparation A_replicate 318.65919
GSM187780PAD_00313_sample 26_preparation A_replicate 119.186519
GSM187781PAD_00314_sample 26_preparation A_replicate 253.348135
GSM187782PAD_00315_sample 26_preparation A_replicate 38.548219
GSM187788PAD_00322_sample 27_preparation A_replicate 111.514711
GSM187789PAD_00323_sample 27_preparation A_replicate 282.814544
GSM187790PAD_00324_sample 27_preparation A_replicate 313.826813
GSM187699PAD_00240_sample 1_preparation B4.968974
GSM187702PAD_00241_sample 2_preparation B49.715933
GSM187705PAD_00242_sample 3_preparation B284.02666
GSM187708PAD_00243_sample 4_preparation B10.666912
GSM187711PAD_00244_sample 5_preparation B2.910682
GSM187714PAD_00245_sample 6_preparation B20.782820
GSM187717PAD_00246_sample 7_preparation B15.754516
GSM187720PAD_00247_sample 8_preparation B70.85736
GSM187723PAD_00264_sample 9_preparation B10.46476
GSM187726PAD_00340_sample 10_preparation B30.568912
GSM187729PAD_00266_sample 11_preparation B16.161517
GSM187732PAD_00267_sample 12_preparation B10.47918
GSM187735PAD_00268_sample 13_preparation B81.225443
GSM187738PAD_00269_sample 14_preparation B69.091334
GSM187741PAD_00270_sample 15_preparation B14.149213
GSM187744PAD_00271_sample 16_preparation B12.51584
GSM187747PAD_00288_sample 17_preparation B120.92148
GSM187750PAD_00289_sample 18_preparation B453.28574
GSM187753PAD_00290_sample 19_preparation B102.43547
GSM187756PAD_00291_sample 20_preparation B55.467233
GSM187759PAD_00292_sample 21_preparation B10.03428
GSM187762PAD_00293_sample 22_preparation B17.244315
GSM187765PAD_00294_sample 23_preparation B69.780343
GSM187768PAD_00295_sample 24_preparation B31.520627
GSM187773PAD_00307_sample 25_preparation B_replicate 17.259694
GSM187774PAD_00308_sample 25_preparation B_replicate 265.354333
GSM187775PAD_00309_sample 25_preparation B_replicate 315.233814
GSM187776PAD_00333_sample 25_preparation B_replicate 311.8337
GSM187783PAD_00316_sample 26_preparation B_replicate 113.989513
GSM187784PAD_00317_sample 26_preparation B_replicate 2123.43350
GSM187791PAD_00325_sample 27_preparation B_replicate 127.455423
GSM187792PAD_00326_sample 27_preparation B_replicate 218.448718
GSM187793PAD_00327_sample 27_preparation B_replicate 319.311819
GSM187700PAD_00248_sample 1_preparation C13.540411
GSM187703PAD_00249_sample 2_preparation C43.882731
GSM187706PAD_00250_sample 3_preparation C239.86763
GSM187709PAD_00251_sample 4_preparation C11.42878
GSM187712PAD_00252_sample 5_preparation C43.65131
GSM187715PAD_00253_sample 6_preparation C93.45443
GSM187718PAD_00254_sample 7_preparation C60.777337
GSM187721PAD_00255_sample 8_preparation C11.16289
GSM187724PAD_00272_sample 9_preparation C71.818138
GSM187727PAD_00273_sample 10_preparation C35.801228
GSM187730PAD_00274_sample 11_preparation C22.025222
GSM187733PAD_00275_sample 12_preparation C5.679146
GSM187736PAD_00276_sample 13_preparation C9.4803510
GSM187739PAD_00277_sample 14_preparation C16.86915
GSM187742PAD_00278_sample 15_preparation C9.301488
GSM187745PAD_00279_sample 16_preparation C5.983537
GSM187748PAD_00296_sample 17_preparation C73.162742
GSM187751PAD_00297_sample 18_preparation C676.0579
GSM187754PAD_00298_sample 19_preparation C9.0593310
GSM187757PAD_00299_sample 20_preparation C56.233839
GSM187760PAD_00300_sample 21_preparation C53.726536
GSM187763PAD_00301_sample 22_preparation C7.349856
GSM187766PAD_00302_sample 23_preparation C22.979622
GSM187769PAD_00303_sample 24_preparation C22.30820
GSM187777PAD_00310_sample 25_preparation C_replicate 17.599416
GSM187778PAD_00311_sample 25_preparation C_replicate 213.996714
GSM187779PAD_00332_sample 25_preparation C_replicate 3116.85547
GSM187785PAD_00320_sample 26_preparation C_replicate 111.746110
GSM187786PAD_00321_sample 26_preparation C_replicate 222.332720
GSM187787PAD_00319_sample 26_preparation C_replicate 366.526239
GSM187794PAD_00328_sample 27_preparation C_replicate 122.146221
GSM187795PAD_00329_sample 27_preparation C_replicate 270.316337
GSM187796PAD_00330_sample 27_preparation C_replicate 326.890724