ProfileGDS2819 / 207020_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 28% 9% 58% 46% 15% 38% 15% 26% 35% 47% 42% 24% 47% 28% 45% 37% 47% 34% 42% 53% 34% 41% 46% 40% 25% 7% 12% 30% 35% 40% 47% 20% 57% 31% 14% 49% 54% 7% 20% 38% 40% 18% 13% 25% 59% 44% 31% 14% 22% 56% 60% 50% 44% 10% 50% 34% 21% 38% 53% 21% 46% 23% 35% 36% 52% 30% 52% 35% 41% 63% 36% 28% 45% 52% 27% 53% 27% 59% 4% 20% 55% 53% 46% 51% 40% 31% 18% 43% 18% 51% 7% 9% 16% 23% 46% 40% 52% 52% 60% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A35.289528
GSM187701PAD_00233_sample 2_preparation A15.0899
GSM187704PAD_00234_sample 3_preparation A194.64258
GSM187707PAD_00331_sample 4_preparation A91.595146
GSM187710PAD_00236_sample 5_preparation A9.9610215
GSM187713PAD_00237_sample 6_preparation A51.319438
GSM187716PAD_00238_sample 7_preparation A11.593215
GSM187719PAD_00239_sample 8_preparation A42.513826
GSM187722PAD_00256_sample 9_preparation A48.312435
GSM187725PAD_00257_sample 10_preparation A91.072547
GSM187728PAD_00258_sample 11_preparation A70.110842
GSM187731PAD_00259_sample 12_preparation A24.646524
GSM187734PAD_00260_sample 13_preparation A96.84147
GSM187737PAD_00261_sample 14_preparation A43.040828
GSM187740PAD_00262_sample 15_preparation A75.685745
GSM187743PAD_00263_sample 16_preparation A42.886437
GSM187746PAD_00280_sample 17_preparation A89.789847
GSM187749PAD_00281_sample 18_preparation A48.621334
GSM187752PAD_00282_sample 19_preparation A69.459942
GSM187755PAD_00283_sample 20_preparation A133.94953
GSM187758PAD_00284_sample 21_preparation A41.457434
GSM187761PAD_00285_sample 22_preparation A74.802641
GSM187764PAD_00286_sample 23_preparation A85.219246
GSM187767PAD_00287_sample 24_preparation A58.143740
GSM187770PAD_00304_sample 25_preparation A_replicate 131.382925
GSM187771PAD_00305_sample 25_preparation A_replicate 28.665057
GSM187772PAD_00306_sample 25_preparation A_replicate 311.944212
GSM187780PAD_00313_sample 26_preparation A_replicate 139.760830
GSM187781PAD_00314_sample 26_preparation A_replicate 251.900535
GSM187782PAD_00315_sample 26_preparation A_replicate 358.082740
GSM187788PAD_00322_sample 27_preparation A_replicate 194.262947
GSM187789PAD_00323_sample 27_preparation A_replicate 222.234820
GSM187790PAD_00324_sample 27_preparation A_replicate 3148.18857
GSM187699PAD_00240_sample 1_preparation B42.638431
GSM187702PAD_00241_sample 2_preparation B12.489514
GSM187705PAD_00242_sample 3_preparation B105.6249
GSM187708PAD_00243_sample 4_preparation B137.36154
GSM187711PAD_00244_sample 5_preparation B6.472917
GSM187714PAD_00245_sample 6_preparation B20.267220
GSM187717PAD_00246_sample 7_preparation B66.269238
GSM187720PAD_00247_sample 8_preparation B88.041840
GSM187723PAD_00264_sample 9_preparation B26.486618
GSM187726PAD_00340_sample 10_preparation B32.601913
GSM187729PAD_00266_sample 11_preparation B31.508925
GSM187732PAD_00267_sample 12_preparation B185.93759
GSM187735PAD_00268_sample 13_preparation B84.610144
GSM187738PAD_00269_sample 14_preparation B57.156231
GSM187741PAD_00270_sample 15_preparation B15.397114
GSM187744PAD_00271_sample 16_preparation B41.956422
GSM187747PAD_00288_sample 17_preparation B162.13356
GSM187750PAD_00289_sample 18_preparation B182.89560
GSM187753PAD_00290_sample 19_preparation B115.27250
GSM187756PAD_00291_sample 20_preparation B92.945244
GSM187759PAD_00292_sample 21_preparation B11.342910
GSM187762PAD_00293_sample 22_preparation B126.94250
GSM187765PAD_00294_sample 23_preparation B46.04934
GSM187768PAD_00295_sample 24_preparation B20.403221
GSM187773PAD_00307_sample 25_preparation B_replicate 175.153838
GSM187774PAD_00308_sample 25_preparation B_replicate 2152.81253
GSM187775PAD_00309_sample 25_preparation B_replicate 324.181521
GSM187776PAD_00333_sample 25_preparation B_replicate 3108.63146
GSM187783PAD_00316_sample 26_preparation B_replicate 126.866223
GSM187784PAD_00317_sample 26_preparation B_replicate 264.520335
GSM187791PAD_00325_sample 27_preparation B_replicate 162.356836
GSM187792PAD_00326_sample 27_preparation B_replicate 2120.58352
GSM187793PAD_00327_sample 27_preparation B_replicate 343.079230
GSM187700PAD_00248_sample 1_preparation C127.94652
GSM187703PAD_00249_sample 2_preparation C53.690635
GSM187706PAD_00250_sample 3_preparation C92.962141
GSM187709PAD_00251_sample 4_preparation C233.62463
GSM187712PAD_00252_sample 5_preparation C55.427936
GSM187715PAD_00253_sample 6_preparation C43.807528
GSM187718PAD_00254_sample 7_preparation C84.988845
GSM187721PAD_00255_sample 8_preparation C127.17952
GSM187724PAD_00272_sample 9_preparation C38.438227
GSM187727PAD_00273_sample 10_preparation C128.65153
GSM187730PAD_00274_sample 11_preparation C31.379527
GSM187733PAD_00275_sample 12_preparation C152.81659
GSM187736PAD_00276_sample 13_preparation C5.064654
GSM187739PAD_00277_sample 14_preparation C24.670720
GSM187742PAD_00278_sample 15_preparation C142.08855
GSM187745PAD_00279_sample 16_preparation C112.63853
GSM187748PAD_00296_sample 17_preparation C87.143946
GSM187751PAD_00297_sample 18_preparation C99.88951
GSM187754PAD_00298_sample 19_preparation C68.69940
GSM187757PAD_00299_sample 20_preparation C38.846831
GSM187760PAD_00300_sample 21_preparation C16.305418
GSM187763PAD_00301_sample 22_preparation C84.816243
GSM187766PAD_00302_sample 23_preparation C17.443318
GSM187769PAD_00303_sample 24_preparation C124.04651
GSM187777PAD_00310_sample 25_preparation C_replicate 18.452967
GSM187778PAD_00311_sample 25_preparation C_replicate 210.13699
GSM187779PAD_00332_sample 25_preparation C_replicate 321.616916
GSM187785PAD_00320_sample 26_preparation C_replicate 126.375723
GSM187786PAD_00321_sample 26_preparation C_replicate 290.125346
GSM187787PAD_00319_sample 26_preparation C_replicate 367.798940
GSM187794PAD_00328_sample 27_preparation C_replicate 1111.98552
GSM187795PAD_00329_sample 27_preparation C_replicate 2133.88652
GSM187796PAD_00330_sample 27_preparation C_replicate 3164.88960