ProfileGDS2819 / 205116_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 40% 13% 55% 59% 19% 17% 20% 45% 30% 3% 7% 37% 52% 48% 50% 29% 40% 38% 37% 58% 57% 17% 57% 15% 52% 52% 9% 32% 14% 45% 52% 38% 10% 49% 44% 41% 29% 39% 20% 11% 50% 13% 46% 24% 34% 13% 37% 36% 43% 44% 47% 37% 39% 19% 33% 32% 23% 42% 37% 38% 46% 53% 57% 29% 8% 43% 41% 49% 44% 28% 39% 26% 41% 41% 40% 13% 32% 46% 41% 45% 17% 40% 6% 37% 43% 38% 36% 47% 17% 26% 20% 50% 32% 22% 31% 40% 29% 11% 23% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A69.392740
GSM187701PAD_00233_sample 2_preparation A18.312813
GSM187704PAD_00234_sample 3_preparation A169.58955
GSM187707PAD_00331_sample 4_preparation A161.15359
GSM187710PAD_00236_sample 5_preparation A13.755219
GSM187713PAD_00237_sample 6_preparation A12.935917
GSM187716PAD_00238_sample 7_preparation A17.29420
GSM187719PAD_00239_sample 8_preparation A111.85445
GSM187722PAD_00256_sample 9_preparation A37.602730
GSM187725PAD_00257_sample 10_preparation A3.865813
GSM187728PAD_00258_sample 11_preparation A5.838117
GSM187731PAD_00259_sample 12_preparation A54.52737
GSM187734PAD_00260_sample 13_preparation A117.13652
GSM187737PAD_00261_sample 14_preparation A110.19748
GSM187740PAD_00262_sample 15_preparation A95.068950
GSM187743PAD_00263_sample 16_preparation A27.217629
GSM187746PAD_00280_sample 17_preparation A67.162640
GSM187749PAD_00281_sample 18_preparation A58.444738
GSM187752PAD_00282_sample 19_preparation A55.697737
GSM187755PAD_00283_sample 20_preparation A159.87758
GSM187758PAD_00284_sample 21_preparation A124.1757
GSM187761PAD_00285_sample 22_preparation A17.617217
GSM187764PAD_00286_sample 23_preparation A131.58257
GSM187767PAD_00287_sample 24_preparation A11.782115
GSM187770PAD_00304_sample 25_preparation A_replicate 1119.76252
GSM187771PAD_00305_sample 25_preparation A_replicate 2114.88552
GSM187772PAD_00306_sample 25_preparation A_replicate 39.573289
GSM187780PAD_00313_sample 26_preparation A_replicate 144.021632
GSM187781PAD_00314_sample 26_preparation A_replicate 214.19614
GSM187782PAD_00315_sample 26_preparation A_replicate 374.80745
GSM187788PAD_00322_sample 27_preparation A_replicate 1114.46852
GSM187789PAD_00323_sample 27_preparation A_replicate 265.579338
GSM187790PAD_00324_sample 27_preparation A_replicate 310.968610
GSM187699PAD_00240_sample 1_preparation B96.207249
GSM187702PAD_00241_sample 2_preparation B84.947444
GSM187705PAD_00242_sample 3_preparation B73.479341
GSM187708PAD_00243_sample 4_preparation B41.115129
GSM187711PAD_00244_sample 5_preparation B64.818339
GSM187714PAD_00245_sample 6_preparation B21.440220
GSM187717PAD_00246_sample 7_preparation B10.24711
GSM187720PAD_00247_sample 8_preparation B129.60950
GSM187723PAD_00264_sample 9_preparation B18.887913
GSM187726PAD_00340_sample 10_preparation B160.13546
GSM187729PAD_00266_sample 11_preparation B28.165924
GSM187732PAD_00267_sample 12_preparation B60.637634
GSM187735PAD_00268_sample 13_preparation B12.05813
GSM187738PAD_00269_sample 14_preparation B79.19437
GSM187741PAD_00270_sample 15_preparation B67.418536
GSM187744PAD_00271_sample 16_preparation B131.45643
GSM187747PAD_00288_sample 17_preparation B102.11644
GSM187750PAD_00289_sample 18_preparation B97.094747
GSM187753PAD_00290_sample 19_preparation B64.672637
GSM187756PAD_00291_sample 20_preparation B72.40239
GSM187759PAD_00292_sample 21_preparation B20.732119
GSM187762PAD_00293_sample 22_preparation B58.630133
GSM187765PAD_00294_sample 23_preparation B41.71132
GSM187768PAD_00295_sample 24_preparation B24.077223
GSM187773PAD_00307_sample 25_preparation B_replicate 192.54342
GSM187774PAD_00308_sample 25_preparation B_replicate 278.813337
GSM187775PAD_00309_sample 25_preparation B_replicate 372.223738
GSM187776PAD_00333_sample 25_preparation B_replicate 3108.38346
GSM187783PAD_00316_sample 26_preparation B_replicate 1127.37853
GSM187784PAD_00317_sample 26_preparation B_replicate 2168.64657
GSM187791PAD_00325_sample 27_preparation B_replicate 143.900329
GSM187792PAD_00326_sample 27_preparation B_replicate 29.298698
GSM187793PAD_00327_sample 27_preparation B_replicate 382.835843
GSM187700PAD_00248_sample 1_preparation C81.341541
GSM187703PAD_00249_sample 2_preparation C101.0449
GSM187706PAD_00250_sample 3_preparation C105.74844
GSM187709PAD_00251_sample 4_preparation C44.413128
GSM187712PAD_00252_sample 5_preparation C63.728339
GSM187715PAD_00253_sample 6_preparation C39.624326
GSM187718PAD_00254_sample 7_preparation C73.513141
GSM187721PAD_00255_sample 8_preparation C79.691541
GSM187724PAD_00272_sample 9_preparation C79.194540
GSM187727PAD_00273_sample 10_preparation C11.208713
GSM187730PAD_00274_sample 11_preparation C42.328732
GSM187733PAD_00275_sample 12_preparation C80.420346
GSM187736PAD_00276_sample 13_preparation C69.381741
GSM187739PAD_00277_sample 14_preparation C98.282745
GSM187742PAD_00278_sample 15_preparation C17.576717
GSM187745PAD_00279_sample 16_preparation C61.132440
GSM187748PAD_00296_sample 17_preparation C6.082176
GSM187751PAD_00297_sample 18_preparation C50.844337
GSM187754PAD_00298_sample 19_preparation C75.82943
GSM187757PAD_00299_sample 20_preparation C53.816138
GSM187760PAD_00300_sample 21_preparation C53.443336
GSM187763PAD_00301_sample 22_preparation C100.80347
GSM187766PAD_00302_sample 23_preparation C16.326717
GSM187769PAD_00303_sample 24_preparation C35.356926
GSM187777PAD_00310_sample 25_preparation C_replicate 120.834220
GSM187778PAD_00311_sample 25_preparation C_replicate 2110.33750
GSM187779PAD_00332_sample 25_preparation C_replicate 360.118232
GSM187785PAD_00320_sample 26_preparation C_replicate 125.767522
GSM187786PAD_00321_sample 26_preparation C_replicate 244.183931
GSM187787PAD_00319_sample 26_preparation C_replicate 367.951440
GSM187794PAD_00328_sample 27_preparation C_replicate 137.372129
GSM187795PAD_00329_sample 27_preparation C_replicate 213.977311
GSM187796PAD_00330_sample 27_preparation C_replicate 325.135523