ProfileGDS2819 / 203038_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 13% 50% 82% 78% 4% 32% 27% 44% 38% 37% 97% 4% 1% 93% 97% 10% 2% 89% 20% 69% 76% 32% 27% 98% 12% 39% 26% 25% 47% 56% 4% 20% 40% 31% 44% 82% 78% 28% 23% 30% 18% 41% 32% 97% 11% 35% 93% 96% 1% 4% 89% 6% 67% 75% 34% 2% 98% 55% 10% 17% 37% 28% 47% 6% 7% 44% 36% 49% 86% 80% 39% 29% 30% 1% 41% 33% 97% 23% 44% 94% 97% 1% 23% 86% 1% 72% 77% 25% 20% 97% 32% 12% 11% 5% 43% 34% 33% 18% 19% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A16.16913
GSM187701PAD_00233_sample 2_preparation A118.67450
GSM187704PAD_00234_sample 3_preparation A763.93382
GSM187707PAD_00331_sample 4_preparation A540.45278
GSM187710PAD_00236_sample 5_preparation A3.629424
GSM187713PAD_00237_sample 6_preparation A39.190132
GSM187716PAD_00238_sample 7_preparation A27.752527
GSM187719PAD_00239_sample 8_preparation A108.13844
GSM187722PAD_00256_sample 9_preparation A55.751738
GSM187725PAD_00257_sample 10_preparation A59.581437
GSM187728PAD_00258_sample 11_preparation A4937.9497
GSM187731PAD_00259_sample 12_preparation A5.720644
GSM187734PAD_00260_sample 13_preparation A3.466511
GSM187737PAD_00261_sample 14_preparation A2401.4693
GSM187740PAD_00262_sample 15_preparation A5337.4797
GSM187743PAD_00263_sample 16_preparation A6.4189210
GSM187746PAD_00280_sample 17_preparation A3.515132
GSM187749PAD_00281_sample 18_preparation A1398.5189
GSM187752PAD_00282_sample 19_preparation A20.102320
GSM187755PAD_00283_sample 20_preparation A271.42969
GSM187758PAD_00284_sample 21_preparation A463.50976
GSM187761PAD_00285_sample 22_preparation A48.038532
GSM187764PAD_00286_sample 23_preparation A32.159527
GSM187767PAD_00287_sample 24_preparation A8278.498
GSM187770PAD_00304_sample 25_preparation A_replicate 112.445112
GSM187771PAD_00305_sample 25_preparation A_replicate 266.539539
GSM187772PAD_00306_sample 25_preparation A_replicate 331.285526
GSM187780PAD_00313_sample 26_preparation A_replicate 129.071425
GSM187781PAD_00314_sample 26_preparation A_replicate 289.942847
GSM187782PAD_00315_sample 26_preparation A_replicate 3115.42556
GSM187788PAD_00322_sample 27_preparation A_replicate 15.632974
GSM187789PAD_00323_sample 27_preparation A_replicate 221.305620
GSM187790PAD_00324_sample 27_preparation A_replicate 372.752940
GSM187699PAD_00240_sample 1_preparation B41.241831
GSM187702PAD_00241_sample 2_preparation B85.240944
GSM187705PAD_00242_sample 3_preparation B876.28682
GSM187708PAD_00243_sample 4_preparation B614.5378
GSM187711PAD_00244_sample 5_preparation B37.182128
GSM187714PAD_00245_sample 6_preparation B26.444123
GSM187717PAD_00246_sample 7_preparation B43.924230
GSM187720PAD_00247_sample 8_preparation B24.229318
GSM187723PAD_00264_sample 9_preparation B95.167841
GSM187726PAD_00340_sample 10_preparation B88.656532
GSM187729PAD_00266_sample 11_preparation B5045.5997
GSM187732PAD_00267_sample 12_preparation B13.420711
GSM187735PAD_00268_sample 13_preparation B55.961135
GSM187738PAD_00269_sample 14_preparation B2197.3993
GSM187741PAD_00270_sample 15_preparation B4507.6296
GSM187744PAD_00271_sample 16_preparation B8.0511
GSM187747PAD_00288_sample 17_preparation B7.54974
GSM187750PAD_00289_sample 18_preparation B1487.9889
GSM187753PAD_00290_sample 19_preparation B7.575846
GSM187756PAD_00291_sample 20_preparation B259.50867
GSM187759PAD_00292_sample 21_preparation B474.61675
GSM187762PAD_00293_sample 22_preparation B63.021134
GSM187765PAD_00294_sample 23_preparation B3.819392
GSM187768PAD_00295_sample 24_preparation B6595.1198
GSM187773PAD_00307_sample 25_preparation B_replicate 1157.18255
GSM187774PAD_00308_sample 25_preparation B_replicate 214.250210
GSM187775PAD_00309_sample 25_preparation B_replicate 318.553617
GSM187776PAD_00333_sample 25_preparation B_replicate 373.889537
GSM187783PAD_00316_sample 26_preparation B_replicate 137.952828
GSM187784PAD_00317_sample 26_preparation B_replicate 2107.73347
GSM187791PAD_00325_sample 27_preparation B_replicate 17.311296
GSM187792PAD_00326_sample 27_preparation B_replicate 28.299557
GSM187793PAD_00327_sample 27_preparation B_replicate 384.369944
GSM187700PAD_00248_sample 1_preparation C62.196636
GSM187703PAD_00249_sample 2_preparation C99.751549
GSM187706PAD_00250_sample 3_preparation C1092.6386
GSM187709PAD_00251_sample 4_preparation C675.74780
GSM187712PAD_00252_sample 5_preparation C66.555439
GSM187715PAD_00253_sample 6_preparation C47.671829
GSM187718PAD_00254_sample 7_preparation C42.482930
GSM187721PAD_00255_sample 8_preparation C4.34881
GSM187724PAD_00272_sample 9_preparation C81.145841
GSM187727PAD_00273_sample 10_preparation C47.696633
GSM187730PAD_00274_sample 11_preparation C5513.0197
GSM187733PAD_00275_sample 12_preparation C21.662123
GSM187736PAD_00276_sample 13_preparation C78.573644
GSM187739PAD_00277_sample 14_preparation C2996.2394
GSM187742PAD_00278_sample 15_preparation C6021.8597
GSM187745PAD_00279_sample 16_preparation C1.77021
GSM187748PAD_00296_sample 17_preparation C24.883823
GSM187751PAD_00297_sample 18_preparation C1140.0186
GSM187754PAD_00298_sample 19_preparation C2.571851
GSM187757PAD_00299_sample 20_preparation C321.34672
GSM187760PAD_00300_sample 21_preparation C517.09377
GSM187763PAD_00301_sample 22_preparation C32.822425
GSM187766PAD_00302_sample 23_preparation C19.627720
GSM187769PAD_00303_sample 24_preparation C6143.6697
GSM187777PAD_00310_sample 25_preparation C_replicate 147.039232
GSM187778PAD_00311_sample 25_preparation C_replicate 212.687712
GSM187779PAD_00332_sample 25_preparation C_replicate 315.278511
GSM187785PAD_00320_sample 26_preparation C_replicate 17.522015
GSM187786PAD_00321_sample 26_preparation C_replicate 281.167343
GSM187787PAD_00319_sample 26_preparation C_replicate 350.878834
GSM187794PAD_00328_sample 27_preparation C_replicate 149.315333
GSM187795PAD_00329_sample 27_preparation C_replicate 220.767618
GSM187796PAD_00330_sample 27_preparation C_replicate 319.433919