ProfileGDS2819 / 202284_s_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 96% 97% 78% 91% 75% 98% 98% 85% 97% 91% 92% 97% 98% 93% 98% 87% 63% 94% 97% 98% 80% 95% 98% 89% 70% 54% 71% 93% 94% 94% 98% 98% 97% 96% 97% 71% 91% 66% 98% 98% 83% 95% 90% 91% 97% 98% 92% 97% 88% 61% 93% 97% 98% 78% 95% 98% 87% 46% 61% 72% 95% 93% 93% 97% 98% 97% 96% 97% 74% 92% 72% 97% 98% 85% 96% 89% 90% 98% 98% 93% 97% 84% 57% 91% 97% 98% 79% 94% 98% 87% 73% 63% 61% 93% 94% 95% 98% 98% 97% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A5051.596
GSM187701PAD_00233_sample 2_preparation A5510.6297
GSM187704PAD_00234_sample 3_preparation A590.64278
GSM187707PAD_00331_sample 4_preparation A1865.6591
GSM187710PAD_00236_sample 5_preparation A467.61175
GSM187713PAD_00237_sample 6_preparation A10036.998
GSM187716PAD_00238_sample 7_preparation A14901.598
GSM187719PAD_00239_sample 8_preparation A937.90185
GSM187722PAD_00256_sample 9_preparation A5052.0297
GSM187725PAD_00257_sample 10_preparation A1942.1291
GSM187728PAD_00258_sample 11_preparation A2014.2692
GSM187731PAD_00259_sample 12_preparation A6723.1197
GSM187734PAD_00260_sample 13_preparation A8572.6398
GSM187737PAD_00261_sample 14_preparation A2470.1593
GSM187740PAD_00262_sample 15_preparation A8077.4398
GSM187743PAD_00263_sample 16_preparation A1258.4987
GSM187746PAD_00280_sample 17_preparation A198.05263
GSM187749PAD_00281_sample 18_preparation A2800.594
GSM187752PAD_00282_sample 19_preparation A6293.4797
GSM187755PAD_00283_sample 20_preparation A8400.6498
GSM187758PAD_00284_sample 21_preparation A641.86480
GSM187761PAD_00285_sample 22_preparation A3570.6295
GSM187764PAD_00286_sample 23_preparation A12694.498
GSM187767PAD_00287_sample 24_preparation A1565.3489
GSM187770PAD_00304_sample 25_preparation A_replicate 1321.73870
GSM187771PAD_00305_sample 25_preparation A_replicate 2128.78854
GSM187772PAD_00306_sample 25_preparation A_replicate 3335.07671
GSM187780PAD_00313_sample 26_preparation A_replicate 12515.2793
GSM187781PAD_00314_sample 26_preparation A_replicate 23134.4794
GSM187782PAD_00315_sample 26_preparation A_replicate 32807.3994
GSM187788PAD_00322_sample 27_preparation A_replicate 18014.0298
GSM187789PAD_00323_sample 27_preparation A_replicate 27610.6998
GSM187790PAD_00324_sample 27_preparation A_replicate 37232.597
GSM187699PAD_00240_sample 1_preparation B4915.1896
GSM187702PAD_00241_sample 2_preparation B5448.7597
GSM187705PAD_00242_sample 3_preparation B392.2671
GSM187708PAD_00243_sample 4_preparation B1951.391
GSM187711PAD_00244_sample 5_preparation B296.98566
GSM187714PAD_00245_sample 6_preparation B8435.4198
GSM187717PAD_00246_sample 7_preparation B12451.898
GSM187720PAD_00247_sample 8_preparation B831.63283
GSM187723PAD_00264_sample 9_preparation B338995
GSM187726PAD_00340_sample 10_preparation B1496.5490
GSM187729PAD_00266_sample 11_preparation B1784.3591
GSM187732PAD_00267_sample 12_preparation B5560.3197
GSM187735PAD_00268_sample 13_preparation B8153.2598
GSM187738PAD_00269_sample 14_preparation B2113.8992
GSM187741PAD_00270_sample 15_preparation B5853.8797
GSM187744PAD_00271_sample 16_preparation B1305.3488
GSM187747PAD_00288_sample 17_preparation B208.27761
GSM187750PAD_00289_sample 18_preparation B2571.3893
GSM187753PAD_00290_sample 19_preparation B5947.2597
GSM187756PAD_00291_sample 20_preparation B7638.9698
GSM187759PAD_00292_sample 21_preparation B590.79278
GSM187762PAD_00293_sample 22_preparation B2990.7295
GSM187765PAD_00294_sample 23_preparation B10758.698
GSM187768PAD_00295_sample 24_preparation B1337.0187
GSM187773PAD_00307_sample 25_preparation B_replicate 1109.57546
GSM187774PAD_00308_sample 25_preparation B_replicate 2222.82861
GSM187775PAD_00309_sample 25_preparation B_replicate 3402.43972
GSM187776PAD_00333_sample 25_preparation B_replicate 33116.7195
GSM187783PAD_00316_sample 26_preparation B_replicate 12596.6493
GSM187784PAD_00317_sample 26_preparation B_replicate 22555.893
GSM187791PAD_00325_sample 27_preparation B_replicate 16117.9397
GSM187792PAD_00326_sample 27_preparation B_replicate 26682.2498
GSM187793PAD_00327_sample 27_preparation B_replicate 36447.8697
GSM187700PAD_00248_sample 1_preparation C3938.8396
GSM187703PAD_00249_sample 2_preparation C5706.7197
GSM187706PAD_00250_sample 3_preparation C465.17574
GSM187709PAD_00251_sample 4_preparation C2010.5492
GSM187712PAD_00252_sample 5_preparation C403.7672
GSM187715PAD_00253_sample 6_preparation C6470.3197
GSM187718PAD_00254_sample 7_preparation C10604.198
GSM187721PAD_00255_sample 8_preparation C1031.8185
GSM187724PAD_00272_sample 9_preparation C4313.0196
GSM187727PAD_00273_sample 10_preparation C1474.4789
GSM187730PAD_00274_sample 11_preparation C1764.3490
GSM187733PAD_00275_sample 12_preparation C8014.6998
GSM187736PAD_00276_sample 13_preparation C9642.8598
GSM187739PAD_00277_sample 14_preparation C2366.6793
GSM187742PAD_00278_sample 15_preparation C5604.8197
GSM187745PAD_00279_sample 16_preparation C951.80984
GSM187748PAD_00296_sample 17_preparation C147.92757
GSM187751PAD_00297_sample 18_preparation C1887.5791
GSM187754PAD_00298_sample 19_preparation C5695.3197
GSM187757PAD_00299_sample 20_preparation C9174.7798
GSM187760PAD_00300_sample 21_preparation C588.69179
GSM187763PAD_00301_sample 22_preparation C2881.7194
GSM187766PAD_00302_sample 23_preparation C11356.398
GSM187769PAD_00303_sample 24_preparation C1264.3287
GSM187777PAD_00310_sample 25_preparation C_replicate 1408.17673
GSM187778PAD_00311_sample 25_preparation C_replicate 2204.14163
GSM187779PAD_00332_sample 25_preparation C_replicate 3201.82661
GSM187785PAD_00320_sample 26_preparation C_replicate 12680.9593
GSM187786PAD_00321_sample 26_preparation C_replicate 23201.7594
GSM187787PAD_00319_sample 26_preparation C_replicate 33287.2595
GSM187794PAD_00328_sample 27_preparation C_replicate 17580.7598
GSM187795PAD_00329_sample 27_preparation C_replicate 27138.2198
GSM187796PAD_00330_sample 27_preparation C_replicate 36561.5697