ProfileGDS2819 / 1569146_s_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 24% 14% 35% 20% 20% 40% 9% 11% 35% 28% 20% 23% 24% 11% 61% 29% 24% 62% 55% 35% 37% 35% 23% 19% 22% 22% 25% 38% 39% 44% 19% 23% 40% 22% 23% 32% 31% 23% 27% 6% 23% 18% 50% 22% 22% 25% 40% 18% 6% 22% 60% 19% 15% 18% 20% 13% 32% 27% 24% 28% 31% 19% 44% 52% 53% 19% 24% 31% 37% 36% 26% 33% 18% 18% 26% 32% 21% 26% 60% 21% 29% 20% 20% 58% 18% 26% 32% 19% 12% 29% 25% 32% 25% 37% 30% 10% 25% 28% 18% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A28.450124
GSM187701PAD_00233_sample 2_preparation A20.027214
GSM187704PAD_00234_sample 3_preparation A73.878635
GSM187707PAD_00331_sample 4_preparation A20.903220
GSM187710PAD_00236_sample 5_preparation A14.791920
GSM187713PAD_00237_sample 6_preparation A57.575240
GSM187716PAD_00238_sample 7_preparation A7.766419
GSM187719PAD_00239_sample 8_preparation A20.3911
GSM187722PAD_00256_sample 9_preparation A48.762135
GSM187725PAD_00257_sample 10_preparation A37.84828
GSM187728PAD_00258_sample 11_preparation A18.422620
GSM187731PAD_00259_sample 12_preparation A22.837323
GSM187734PAD_00260_sample 13_preparation A29.808124
GSM187737PAD_00261_sample 14_preparation A14.439911
GSM187740PAD_00262_sample 15_preparation A169.9561
GSM187743PAD_00263_sample 16_preparation A27.724829
GSM187746PAD_00280_sample 17_preparation A28.446524
GSM187749PAD_00281_sample 18_preparation A173.75762
GSM187752PAD_00282_sample 19_preparation A124.42755
GSM187755PAD_00283_sample 20_preparation A60.957435
GSM187758PAD_00284_sample 21_preparation A48.375537
GSM187761PAD_00285_sample 22_preparation A57.570335
GSM187764PAD_00286_sample 23_preparation A25.359123
GSM187767PAD_00287_sample 24_preparation A15.503419
GSM187770PAD_00304_sample 25_preparation A_replicate 125.359622
GSM187771PAD_00305_sample 25_preparation A_replicate 225.727322
GSM187772PAD_00306_sample 25_preparation A_replicate 329.485325
GSM187780PAD_00313_sample 26_preparation A_replicate 160.330838
GSM187781PAD_00314_sample 26_preparation A_replicate 262.301639
GSM187782PAD_00315_sample 26_preparation A_replicate 369.535944
GSM187788PAD_00322_sample 27_preparation A_replicate 119.722719
GSM187789PAD_00323_sample 27_preparation A_replicate 226.638723
GSM187790PAD_00324_sample 27_preparation A_replicate 374.141540
GSM187699PAD_00240_sample 1_preparation B21.993322
GSM187702PAD_00241_sample 2_preparation B24.933323
GSM187705PAD_00242_sample 3_preparation B47.933332
GSM187708PAD_00243_sample 4_preparation B45.600831
GSM187711PAD_00244_sample 5_preparation B25.227323
GSM187714PAD_00245_sample 6_preparation B35.208727
GSM187717PAD_00246_sample 7_preparation B7.164246
GSM187720PAD_00247_sample 8_preparation B32.386923
GSM187723PAD_00264_sample 9_preparation B26.375218
GSM187726PAD_00340_sample 10_preparation B190.62550
GSM187729PAD_00266_sample 11_preparation B24.33622
GSM187732PAD_00267_sample 12_preparation B28.033322
GSM187735PAD_00268_sample 13_preparation B32.290325
GSM187738PAD_00269_sample 14_preparation B90.810240
GSM187741PAD_00270_sample 15_preparation B20.198518
GSM187744PAD_00271_sample 16_preparation B15.57266
GSM187747PAD_00288_sample 17_preparation B31.226322
GSM187750PAD_00289_sample 18_preparation B185.76560
GSM187753PAD_00290_sample 19_preparation B19.936819
GSM187756PAD_00291_sample 20_preparation B17.89215
GSM187759PAD_00292_sample 21_preparation B19.783418
GSM187762PAD_00293_sample 22_preparation B24.296920
GSM187765PAD_00294_sample 23_preparation B11.028313
GSM187768PAD_00295_sample 24_preparation B46.003432
GSM187773PAD_00307_sample 25_preparation B_replicate 140.343727
GSM187774PAD_00308_sample 25_preparation B_replicate 238.773224
GSM187775PAD_00309_sample 25_preparation B_replicate 340.652428
GSM187776PAD_00333_sample 25_preparation B_replicate 353.974631
GSM187783PAD_00316_sample 26_preparation B_replicate 120.65819
GSM187784PAD_00317_sample 26_preparation B_replicate 293.863644
GSM187791PAD_00325_sample 27_preparation B_replicate 1122.32452
GSM187792PAD_00326_sample 27_preparation B_replicate 2127.83853
GSM187793PAD_00327_sample 27_preparation B_replicate 319.57319
GSM187700PAD_00248_sample 1_preparation C30.909724
GSM187703PAD_00249_sample 2_preparation C42.63531
GSM187706PAD_00250_sample 3_preparation C77.776937
GSM187709PAD_00251_sample 4_preparation C67.055736
GSM187712PAD_00252_sample 5_preparation C29.860526
GSM187715PAD_00253_sample 6_preparation C59.533433
GSM187718PAD_00254_sample 7_preparation C19.030918
GSM187721PAD_00255_sample 8_preparation C21.528818
GSM187724PAD_00272_sample 9_preparation C37.323626
GSM187727PAD_00273_sample 10_preparation C44.156732
GSM187730PAD_00274_sample 11_preparation C19.252821
GSM187733PAD_00275_sample 12_preparation C27.696526
GSM187736PAD_00276_sample 13_preparation C169.760
GSM187739PAD_00277_sample 14_preparation C26.731221
GSM187742PAD_00278_sample 15_preparation C38.956529
GSM187745PAD_00279_sample 16_preparation C17.39920
GSM187748PAD_00296_sample 17_preparation C20.148920
GSM187751PAD_00297_sample 18_preparation C149.18158
GSM187754PAD_00298_sample 19_preparation C17.38918
GSM187757PAD_00299_sample 20_preparation C27.124626
GSM187760PAD_00300_sample 21_preparation C42.489332
GSM187763PAD_00301_sample 22_preparation C20.211819
GSM187766PAD_00302_sample 23_preparation C10.795612
GSM187769PAD_00303_sample 24_preparation C42.249129
GSM187777PAD_00310_sample 25_preparation C_replicate 129.287225
GSM187778PAD_00311_sample 25_preparation C_replicate 249.3432
GSM187779PAD_00332_sample 25_preparation C_replicate 339.194525
GSM187785PAD_00320_sample 26_preparation C_replicate 162.829737
GSM187786PAD_00321_sample 26_preparation C_replicate 240.484830
GSM187787PAD_00319_sample 26_preparation C_replicate 310.897410
GSM187794PAD_00328_sample 27_preparation C_replicate 128.097825
GSM187795PAD_00329_sample 27_preparation C_replicate 242.596228
GSM187796PAD_00330_sample 27_preparation C_replicate 317.673518