ProfileGDS2819 / 1568934_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 19% 34% 11% 38% 38% 18% 27% 4% 44% 58% 15% 49% 20% 55% 14% 13% 37% 33% 5% 8% 21% 41% 52% 23% 44% 40% 52% 22% 13% 45% 15% 25% 37% 24% 8% 20% 39% 41% 18% 34% 36% 33% 6% 15% 44% 17% 17% 11% 38% 15% 48% 22% 54% 24% 11% 39% 16% 36% 32% 11% 14% 54% 29% 17% 12% 24% 31% 33% 36% 30% 39% 18% 36% 13% 43% 47% 49% 33% 46% 31% 9% 38% 17% 50% 36% 42% 32% 13% 32% 11% 28% 12% 44% 44% 30% 21% 8% 6% 30% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A21.196419
GSM187701PAD_00233_sample 2_preparation A57.628134
GSM187704PAD_00234_sample 3_preparation A18.652211
GSM187707PAD_00331_sample 4_preparation A64.009938
GSM187710PAD_00236_sample 5_preparation A46.218738
GSM187713PAD_00237_sample 6_preparation A14.689218
GSM187716PAD_00238_sample 7_preparation A29.033827
GSM187719PAD_00239_sample 8_preparation A12.16934
GSM187722PAD_00256_sample 9_preparation A73.30744
GSM187725PAD_00257_sample 10_preparation A149.81958
GSM187728PAD_00258_sample 11_preparation A12.632115
GSM187731PAD_00259_sample 12_preparation A88.860949
GSM187734PAD_00260_sample 13_preparation A23.468620
GSM187737PAD_00261_sample 14_preparation A145.22855
GSM187740PAD_00262_sample 15_preparation A10.979514
GSM187743PAD_00263_sample 16_preparation A7.9886613
GSM187746PAD_00280_sample 17_preparation A59.639937
GSM187749PAD_00281_sample 18_preparation A45.346333
GSM187752PAD_00282_sample 19_preparation A6.72635
GSM187755PAD_00283_sample 20_preparation A11.76928
GSM187758PAD_00284_sample 21_preparation A18.142621
GSM187761PAD_00285_sample 22_preparation A74.088641
GSM187764PAD_00286_sample 23_preparation A107.8652
GSM187767PAD_00287_sample 24_preparation A21.682423
GSM187770PAD_00304_sample 25_preparation A_replicate 185.361744
GSM187771PAD_00305_sample 25_preparation A_replicate 269.922340
GSM187772PAD_00306_sample 25_preparation A_replicate 3113.97352
GSM187780PAD_00313_sample 26_preparation A_replicate 123.411222
GSM187781PAD_00314_sample 26_preparation A_replicate 213.463113
GSM187782PAD_00315_sample 26_preparation A_replicate 374.337445
GSM187788PAD_00322_sample 27_preparation A_replicate 114.600815
GSM187789PAD_00323_sample 27_preparation A_replicate 231.784325
GSM187790PAD_00324_sample 27_preparation A_replicate 365.178937
GSM187699PAD_00240_sample 1_preparation B26.655124
GSM187702PAD_00241_sample 2_preparation B7.268548
GSM187705PAD_00242_sample 3_preparation B20.851120
GSM187708PAD_00243_sample 4_preparation B68.710739
GSM187711PAD_00244_sample 5_preparation B70.596941
GSM187714PAD_00245_sample 6_preparation B17.596518
GSM187717PAD_00246_sample 7_preparation B52.916334
GSM187720PAD_00247_sample 8_preparation B72.704536
GSM187723PAD_00264_sample 9_preparation B68.528233
GSM187726PAD_00340_sample 10_preparation B21.86696
GSM187729PAD_00266_sample 11_preparation B13.231615
GSM187732PAD_00267_sample 12_preparation B96.337844
GSM187735PAD_00268_sample 13_preparation B16.695117
GSM187738PAD_00269_sample 14_preparation B24.197617
GSM187741PAD_00270_sample 15_preparation B12.173811
GSM187744PAD_00271_sample 16_preparation B103.36438
GSM187747PAD_00288_sample 17_preparation B18.350215
GSM187750PAD_00289_sample 18_preparation B101.36348
GSM187753PAD_00290_sample 19_preparation B24.508622
GSM187756PAD_00291_sample 20_preparation B138.48854
GSM187759PAD_00292_sample 21_preparation B29.509424
GSM187762PAD_00293_sample 22_preparation B12.157711
GSM187765PAD_00294_sample 23_preparation B60.888139
GSM187768PAD_00295_sample 24_preparation B14.224316
GSM187773PAD_00307_sample 25_preparation B_replicate 169.383536
GSM187774PAD_00308_sample 25_preparation B_replicate 263.782232
GSM187775PAD_00309_sample 25_preparation B_replicate 312.126511
GSM187776PAD_00333_sample 25_preparation B_replicate 318.978214
GSM187783PAD_00316_sample 26_preparation B_replicate 1128.5454
GSM187784PAD_00317_sample 26_preparation B_replicate 242.748529
GSM187791PAD_00325_sample 27_preparation B_replicate 117.246817
GSM187792PAD_00326_sample 27_preparation B_replicate 212.113212
GSM187793PAD_00327_sample 27_preparation B_replicate 327.206124
GSM187700PAD_00248_sample 1_preparation C47.294431
GSM187703PAD_00249_sample 2_preparation C49.927433
GSM187706PAD_00250_sample 3_preparation C74.050836
GSM187709PAD_00251_sample 4_preparation C49.382530
GSM187712PAD_00252_sample 5_preparation C66.197839
GSM187715PAD_00253_sample 6_preparation C24.441818
GSM187718PAD_00254_sample 7_preparation C58.022536
GSM187721PAD_00255_sample 8_preparation C15.098513
GSM187724PAD_00272_sample 9_preparation C88.983943
GSM187727PAD_00273_sample 10_preparation C93.855247
GSM187730PAD_00274_sample 11_preparation C94.266249
GSM187733PAD_00275_sample 12_preparation C42.857233
GSM187736PAD_00276_sample 13_preparation C85.802346
GSM187739PAD_00277_sample 14_preparation C50.793431
GSM187742PAD_00278_sample 15_preparation C9.721479
GSM187745PAD_00279_sample 16_preparation C57.225338
GSM187748PAD_00296_sample 17_preparation C16.076417
GSM187751PAD_00297_sample 18_preparation C96.697450
GSM187754PAD_00298_sample 19_preparation C55.643736
GSM187757PAD_00299_sample 20_preparation C63.74342
GSM187760PAD_00300_sample 21_preparation C43.922732
GSM187763PAD_00301_sample 22_preparation C13.112813
GSM187766PAD_00302_sample 23_preparation C42.891232
GSM187769PAD_00303_sample 24_preparation C11.970711
GSM187777PAD_00310_sample 25_preparation C_replicate 137.505228
GSM187778PAD_00311_sample 25_preparation C_replicate 212.849612
GSM187779PAD_00332_sample 25_preparation C_replicate 3103.57544
GSM187785PAD_00320_sample 26_preparation C_replicate 183.673744
GSM187786PAD_00321_sample 26_preparation C_replicate 242.457130
GSM187787PAD_00319_sample 26_preparation C_replicate 323.385121
GSM187794PAD_00328_sample 27_preparation C_replicate 18.596498
GSM187795PAD_00329_sample 27_preparation C_replicate 28.729926
GSM187796PAD_00330_sample 27_preparation C_replicate 342.684530