ProfileGDS2819 / 1563335_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 75% 74% 30% 70% 18% 78% 80% 43% 67% 75% 13% 72% 80% 54% 54% 68% 65% 18% 75% 67% 33% 36% 54% 48% 54% 59% 67% 41% 15% 14% 62% 61% 62% 66% 62% 10% 68% 22% 72% 85% 52% 61% 69% 44% 53% 73% 12% 50% 72% 59% 1% 69% 61% 11% 8% 67% 55% 4% 26% 36% 49% 18% 11% 46% 54% 66% 71% 69% 2% 73% 28% 77% 80% 62% 69% 70% 47% 62% 73% 30% 53% 59% 64% 1% 77% 62% 20% 24% 64% 48% 65% 47% 50% 40% 28% 40% 60% 66% 68% sort by protocol sort by individual sort by disease state Gene Expression Profile
Graph caption help
SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A381.76675
GSM187701PAD_00233_sample 2_preparation A391.64774
GSM187704PAD_00234_sample 3_preparation A54.972430
GSM187707PAD_00331_sample 4_preparation A320.87570
GSM187710PAD_00236_sample 5_preparation A12.952718
GSM187713PAD_00237_sample 6_preparation A509.70678
GSM187716PAD_00238_sample 7_preparation A567.76380
GSM187719PAD_00239_sample 8_preparation A100.38543
GSM187722PAD_00256_sample 9_preparation A256.45467
GSM187725PAD_00257_sample 10_preparation A479.57975
GSM187728PAD_00258_sample 11_preparation A10.787513
GSM187731PAD_00259_sample 12_preparation A332.9572
GSM187734PAD_00260_sample 13_preparation A590.30580
GSM187737PAD_00261_sample 14_preparation A143.39954
GSM187740PAD_00262_sample 15_preparation A111.01754
GSM187743PAD_00263_sample 16_preparation A227.64768
GSM187746PAD_00280_sample 17_preparation A223.44265
GSM187749PAD_00281_sample 18_preparation A18.225318
GSM187752PAD_00282_sample 19_preparation A454.06375
GSM187755PAD_00283_sample 20_preparation A241.80667
GSM187758PAD_00284_sample 21_preparation A39.682733
GSM187761PAD_00285_sample 22_preparation A59.722936
GSM187764PAD_00286_sample 23_preparation A116.654
GSM187767PAD_00287_sample 24_preparation A84.937348
GSM187770PAD_00304_sample 25_preparation A_replicate 1130.68354
GSM187771PAD_00305_sample 25_preparation A_replicate 2157.61459
GSM187772PAD_00306_sample 25_preparation A_replicate 3263.6667
GSM187780PAD_00313_sample 26_preparation A_replicate 167.073641
GSM187781PAD_00314_sample 26_preparation A_replicate 215.379415
GSM187782PAD_00315_sample 26_preparation A_replicate 312.318514
GSM187788PAD_00322_sample 27_preparation A_replicate 1189.54162
GSM187789PAD_00323_sample 27_preparation A_replicate 2168.53161
GSM187790PAD_00324_sample 27_preparation A_replicate 3186.662
GSM187699PAD_00240_sample 1_preparation B234.36566
GSM187702PAD_00241_sample 2_preparation B215.86862
GSM187705PAD_00242_sample 3_preparation B8.616910
GSM187708PAD_00243_sample 4_preparation B322.98468
GSM187711PAD_00244_sample 5_preparation B24.405322
GSM187714PAD_00245_sample 6_preparation B377.97472
GSM187717PAD_00246_sample 7_preparation B890.77685
GSM187720PAD_00247_sample 8_preparation B140.46752
GSM187723PAD_00264_sample 9_preparation B232.37261
GSM187726PAD_00340_sample 10_preparation B402.21269
GSM187729PAD_00266_sample 11_preparation B84.680244
GSM187732PAD_00267_sample 12_preparation B139.51953
GSM187735PAD_00268_sample 13_preparation B430.92173
GSM187738PAD_00269_sample 14_preparation B16.778112
GSM187741PAD_00270_sample 15_preparation B123.83150
GSM187744PAD_00271_sample 16_preparation B456.28772
GSM187747PAD_00288_sample 17_preparation B190.12359
GSM187750PAD_00289_sample 18_preparation B3.018171
GSM187753PAD_00290_sample 19_preparation B342.84169
GSM187756PAD_00291_sample 20_preparation B182.86661
GSM187759PAD_00292_sample 21_preparation B12.436411
GSM187762PAD_00293_sample 22_preparation B9.600698
GSM187765PAD_00294_sample 23_preparation B250.43967
GSM187768PAD_00295_sample 24_preparation B136.8755
GSM187773PAD_00307_sample 25_preparation B_replicate 17.303414
GSM187774PAD_00308_sample 25_preparation B_replicate 243.982626
GSM187775PAD_00309_sample 25_preparation B_replicate 365.656436
GSM187776PAD_00333_sample 25_preparation B_replicate 3122.00449
GSM187783PAD_00316_sample 26_preparation B_replicate 119.752818
GSM187784PAD_00317_sample 26_preparation B_replicate 213.929211
GSM187791PAD_00325_sample 27_preparation B_replicate 197.942946
GSM187792PAD_00326_sample 27_preparation B_replicate 2134.08254
GSM187793PAD_00327_sample 27_preparation B_replicate 3262.29866
GSM187700PAD_00248_sample 1_preparation C339.59871
GSM187703PAD_00249_sample 2_preparation C320.91869
GSM187706PAD_00250_sample 3_preparation C7.164082
GSM187709PAD_00251_sample 4_preparation C419.06373
GSM187712PAD_00252_sample 5_preparation C36.669428
GSM187715PAD_00253_sample 6_preparation C510.31277
GSM187718PAD_00254_sample 7_preparation C590.55880
GSM187721PAD_00255_sample 8_preparation C210.93762
GSM187724PAD_00272_sample 9_preparation C338.24569
GSM187727PAD_00273_sample 10_preparation C355.61870
GSM187730PAD_00274_sample 11_preparation C86.888147
GSM187733PAD_00275_sample 12_preparation C184.35962
GSM187736PAD_00276_sample 13_preparation C385.89273
GSM187739PAD_00277_sample 14_preparation C46.605730
GSM187742PAD_00278_sample 15_preparation C129.39253
GSM187745PAD_00279_sample 16_preparation C158.78759
GSM187748PAD_00296_sample 17_preparation C237.80764
GSM187751PAD_00297_sample 18_preparation C2.024771
GSM187754PAD_00298_sample 19_preparation C565.42877
GSM187757PAD_00299_sample 20_preparation C171.42362
GSM187760PAD_00300_sample 21_preparation C19.821720
GSM187763PAD_00301_sample 22_preparation C29.762924
GSM187766PAD_00302_sample 23_preparation C197.73164
GSM187769PAD_00303_sample 24_preparation C108.59548
GSM187777PAD_00310_sample 25_preparation C_replicate 1244.62765
GSM187778PAD_00311_sample 25_preparation C_replicate 294.57147
GSM187779PAD_00332_sample 25_preparation C_replicate 3127.61550
GSM187785PAD_00320_sample 26_preparation C_replicate 170.600540
GSM187786PAD_00321_sample 26_preparation C_replicate 236.350628
GSM187787PAD_00319_sample 26_preparation C_replicate 367.503240
GSM187794PAD_00328_sample 27_preparation C_replicate 1168.24160
GSM187795PAD_00329_sample 27_preparation C_replicate 2257.96266
GSM187796PAD_00330_sample 27_preparation C_replicate 3278.43968