ProfileGDS2819 / 1561093_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 73% 74% 44% 68% 54% 72% 70% 74% 69% 67% 59% 68% 74% 60% 67% 66% 71% 65% 61% 76% 63% 63% 73% 62% 76% 72% 71% 69% 66% 65% 68% 72% 60% 71% 60% 62% 64% 54% 68% 64% 69% 65% 50% 55% 27% 72% 65% 66% 63% 68% 60% 65% 70% 68% 63% 65% 29% 64% 73% 72% 72% 67% 70% 52% 60% 56% 73% 67% 57% 65% 59% 74% 56% 69% 68% 59% 59% 64% 68% 52% 61% 62% 73% 58% 65% 68% 63% 65% 70% 64% 70% 66% 64% 69% 68% 70% 57% 73% 66% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A345.24273
GSM187701PAD_00233_sample 2_preparation A392.38974
GSM187704PAD_00234_sample 3_preparation A107.90944
GSM187707PAD_00331_sample 4_preparation A272.26468
GSM187710PAD_00236_sample 5_preparation A98.224354
GSM187713PAD_00237_sample 6_preparation A318.98972
GSM187716PAD_00238_sample 7_preparation A246.92270
GSM187719PAD_00239_sample 8_preparation A388.42474
GSM187722PAD_00256_sample 9_preparation A294.78569
GSM187725PAD_00257_sample 10_preparation A261.88767
GSM187728PAD_00258_sample 11_preparation A164.83959
GSM187731PAD_00259_sample 12_preparation A242.26868
GSM187734PAD_00260_sample 13_preparation A382.62674
GSM187737PAD_00261_sample 14_preparation A184.87560
GSM187740PAD_00262_sample 15_preparation A252.66167
GSM187743PAD_00263_sample 16_preparation A203.32266
GSM187746PAD_00280_sample 17_preparation A345.94471
GSM187749PAD_00281_sample 18_preparation A215.65565
GSM187752PAD_00282_sample 19_preparation A173.65261
GSM187755PAD_00283_sample 20_preparation A423.05176
GSM187758PAD_00284_sample 21_preparation A172.26363
GSM187761PAD_00285_sample 22_preparation A222.81463
GSM187764PAD_00286_sample 23_preparation A356.37273
GSM187767PAD_00287_sample 24_preparation A186.18462
GSM187770PAD_00304_sample 25_preparation A_replicate 1487.19876
GSM187771PAD_00305_sample 25_preparation A_replicate 2367.97972
GSM187772PAD_00306_sample 25_preparation A_replicate 3337.66571
GSM187780PAD_00313_sample 26_preparation A_replicate 1263.78769
GSM187781PAD_00314_sample 26_preparation A_replicate 2222.25666
GSM187782PAD_00315_sample 26_preparation A_replicate 3200.18665
GSM187788PAD_00322_sample 27_preparation A_replicate 1261.59968
GSM187789PAD_00323_sample 27_preparation A_replicate 2339.27672
GSM187790PAD_00324_sample 27_preparation A_replicate 3164.48660
GSM187699PAD_00240_sample 1_preparation B332.05771
GSM187702PAD_00241_sample 2_preparation B190.00160
GSM187705PAD_00242_sample 3_preparation B224.05262
GSM187708PAD_00243_sample 4_preparation B236.06364
GSM187711PAD_00244_sample 5_preparation B140.78354
GSM187714PAD_00245_sample 6_preparation B288.05368
GSM187717PAD_00246_sample 7_preparation B202.95964
GSM187720PAD_00247_sample 8_preparation B331.29569
GSM187723PAD_00264_sample 9_preparation B280.82565
GSM187726PAD_00340_sample 10_preparation B189.52850
GSM187729PAD_00266_sample 11_preparation B152.89755
GSM187732PAD_00267_sample 12_preparation B38.190327
GSM187735PAD_00268_sample 13_preparation B396.2772
GSM187738PAD_00269_sample 14_preparation B270.89765
GSM187741PAD_00270_sample 15_preparation B281.48766
GSM187744PAD_00271_sample 16_preparation B286.19763
GSM187747PAD_00288_sample 17_preparation B311.34368
GSM187750PAD_00289_sample 18_preparation B177.32960
GSM187753PAD_00290_sample 19_preparation B274.00365
GSM187756PAD_00291_sample 20_preparation B304.81270
GSM187759PAD_00292_sample 21_preparation B281.68468
GSM187762PAD_00293_sample 22_preparation B245.5963
GSM187765PAD_00294_sample 23_preparation B217.91265
GSM187768PAD_00295_sample 24_preparation B37.194929
GSM187773PAD_00307_sample 25_preparation B_replicate 1254.30464
GSM187774PAD_00308_sample 25_preparation B_replicate 2447.74173
GSM187775PAD_00309_sample 25_preparation B_replicate 3399.92772
GSM187776PAD_00333_sample 25_preparation B_replicate 3371.32772
GSM187783PAD_00316_sample 26_preparation B_replicate 1258.91267
GSM187784PAD_00317_sample 26_preparation B_replicate 2333.32270
GSM187791PAD_00325_sample 27_preparation B_replicate 1122.56252
GSM187792PAD_00326_sample 27_preparation B_replicate 2181.81360
GSM187793PAD_00327_sample 27_preparation B_replicate 3151.69856
GSM187700PAD_00248_sample 1_preparation C396.40173
GSM187703PAD_00249_sample 2_preparation C280.84467
GSM187706PAD_00250_sample 3_preparation C182.74257
GSM187709PAD_00251_sample 4_preparation C249.87765
GSM187712PAD_00252_sample 5_preparation C170.81159
GSM187715PAD_00253_sample 6_preparation C408.78574
GSM187718PAD_00254_sample 7_preparation C132.59456
GSM187721PAD_00255_sample 8_preparation C319.97969
GSM187724PAD_00272_sample 9_preparation C309.67968
GSM187727PAD_00273_sample 10_preparation C183.5259
GSM187730PAD_00274_sample 11_preparation C162.11659
GSM187733PAD_00275_sample 12_preparation C199.54164
GSM187736PAD_00276_sample 13_preparation C277.37168
GSM187739PAD_00277_sample 14_preparation C131.05352
GSM187742PAD_00278_sample 15_preparation C195.53361
GSM187745PAD_00279_sample 16_preparation C188.51362
GSM187748PAD_00296_sample 17_preparation C429.97573
GSM187751PAD_00297_sample 18_preparation C145.56858
GSM187754PAD_00298_sample 19_preparation C240.08665
GSM187757PAD_00299_sample 20_preparation C257.31368
GSM187760PAD_00300_sample 21_preparation C190.05463
GSM187763PAD_00301_sample 22_preparation C263.62965
GSM187766PAD_00302_sample 23_preparation C293.24570
GSM187769PAD_00303_sample 24_preparation C239.97264
GSM187777PAD_00310_sample 25_preparation C_replicate 1320.74770
GSM187778PAD_00311_sample 25_preparation C_replicate 2255.39666
GSM187779PAD_00332_sample 25_preparation C_replicate 3234.46164
GSM187785PAD_00320_sample 26_preparation C_replicate 1270.75369
GSM187786PAD_00321_sample 26_preparation C_replicate 2259.91668
GSM187787PAD_00319_sample 26_preparation C_replicate 3288.69470
GSM187794PAD_00328_sample 27_preparation C_replicate 1144.60657
GSM187795PAD_00329_sample 27_preparation C_replicate 2395.38173
GSM187796PAD_00330_sample 27_preparation C_replicate 3241.59666