ProfileGDS2819 / 1554026_a_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 59% 90% 50% 92% 58% 59% 98% 28% 37% 43% 87% 61% 93% 81% 93% 46% 41% 26% 39% 54% 38% 83% 63% 73% 37% 35% 47% 53% 17% 37% 79% 75% 80% 19% 94% 47% 92% 68% 56% 98% 22% 51% 44% 92% 70% 94% 84% 93% 45% 38% 24% 14% 25% 33% 85% 51% 76% 41% 13% 22% 29% 30% 10% 77% 75% 79% 58% 92% 17% 91% 64% 65% 98% 39% 33% 23% 88% 67% 91% 85% 93% 4% 46% 40% 25% 17% 40% 86% 26% 73% 45% 15% 48% 55% 33% 13% 81% 72% 79% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A151.92759
GSM187701PAD_00233_sample 2_preparation A1623.2790
GSM187704PAD_00234_sample 3_preparation A140.85150
GSM187707PAD_00331_sample 4_preparation A2198.3292
GSM187710PAD_00236_sample 5_preparation A127.22958
GSM187713PAD_00237_sample 6_preparation A138.31159
GSM187716PAD_00238_sample 7_preparation A13981.198
GSM187719PAD_00239_sample 8_preparation A46.03728
GSM187722PAD_00256_sample 9_preparation A54.390137
GSM187725PAD_00257_sample 10_preparation A76.64243
GSM187728PAD_00258_sample 11_preparation A1223.3387
GSM187731PAD_00259_sample 12_preparation A155.55561
GSM187734PAD_00260_sample 13_preparation A2284.8993
GSM187737PAD_00261_sample 14_preparation A684.72781
GSM187740PAD_00262_sample 15_preparation A2426.3593
GSM187743PAD_00263_sample 16_preparation A63.540346
GSM187746PAD_00280_sample 17_preparation A70.817441
GSM187749PAD_00281_sample 18_preparation A30.549626
GSM187752PAD_00282_sample 19_preparation A62.053839
GSM187755PAD_00283_sample 20_preparation A139.31454
GSM187758PAD_00284_sample 21_preparation A52.511838
GSM187761PAD_00285_sample 22_preparation A899.99283
GSM187764PAD_00286_sample 23_preparation A173.92363
GSM187767PAD_00287_sample 24_preparation A407.63873
GSM187770PAD_00304_sample 25_preparation A_replicate 163.111137
GSM187771PAD_00305_sample 25_preparation A_replicate 256.914635
GSM187772PAD_00306_sample 25_preparation A_replicate 390.895747
GSM187780PAD_00313_sample 26_preparation A_replicate 1114.40453
GSM187781PAD_00314_sample 26_preparation A_replicate 217.862217
GSM187782PAD_00315_sample 26_preparation A_replicate 351.506837
GSM187788PAD_00322_sample 27_preparation A_replicate 1597.35679
GSM187789PAD_00323_sample 27_preparation A_replicate 2430.61675
GSM187790PAD_00324_sample 27_preparation A_replicate 3613.82680
GSM187699PAD_00240_sample 1_preparation B18.032819
GSM187702PAD_00241_sample 2_preparation B2689.4994
GSM187705PAD_00242_sample 3_preparation B96.057447
GSM187708PAD_00243_sample 4_preparation B2093.1192
GSM187711PAD_00244_sample 5_preparation B330.13368
GSM187714PAD_00245_sample 6_preparation B141.27856
GSM187717PAD_00246_sample 7_preparation B11072.298
GSM187720PAD_00247_sample 8_preparation B30.057822
GSM187723PAD_00264_sample 9_preparation B144.56451
GSM187726PAD_00340_sample 10_preparation B150.86744
GSM187729PAD_00266_sample 11_preparation B2032.2792
GSM187732PAD_00267_sample 12_preparation B331.40770
GSM187735PAD_00268_sample 13_preparation B2637.1794
GSM187738PAD_00269_sample 14_preparation B935.29684
GSM187741PAD_00270_sample 15_preparation B2385.1693
GSM187744PAD_00271_sample 16_preparation B142.55645
GSM187747PAD_00288_sample 17_preparation B77.795538
GSM187750PAD_00289_sample 18_preparation B28.838624
GSM187753PAD_00290_sample 19_preparation B14.163714
GSM187756PAD_00291_sample 20_preparation B34.244925
GSM187759PAD_00292_sample 21_preparation B52.466233
GSM187762PAD_00293_sample 22_preparation B1099.8585
GSM187765PAD_00294_sample 23_preparation B99.676951
GSM187768PAD_00295_sample 24_preparation B539.82576
GSM187773PAD_00307_sample 25_preparation B_replicate 188.842441
GSM187774PAD_00308_sample 25_preparation B_replicate 217.940213
GSM187775PAD_00309_sample 25_preparation B_replicate 325.81322
GSM187776PAD_00333_sample 25_preparation B_replicate 345.595829
GSM187783PAD_00316_sample 26_preparation B_replicate 142.738530
GSM187784PAD_00317_sample 26_preparation B_replicate 212.672810
GSM187791PAD_00325_sample 27_preparation B_replicate 1523.68477
GSM187792PAD_00326_sample 27_preparation B_replicate 2457.9175
GSM187793PAD_00327_sample 27_preparation B_replicate 3615.08879
GSM187700PAD_00248_sample 1_preparation C168.22558
GSM187703PAD_00249_sample 2_preparation C2190.2992
GSM187706PAD_00250_sample 3_preparation C22.745317
GSM187709PAD_00251_sample 4_preparation C1772.3791
GSM187712PAD_00252_sample 5_preparation C224.47264
GSM187715PAD_00253_sample 6_preparation C245.46265
GSM187718PAD_00254_sample 7_preparation C13229.298
GSM187721PAD_00255_sample 8_preparation C73.229839
GSM187724PAD_00272_sample 9_preparation C56.74133
GSM187727PAD_00273_sample 10_preparation C23.832823
GSM187730PAD_00274_sample 11_preparation C1329.3988
GSM187733PAD_00275_sample 12_preparation C243.3867
GSM187736PAD_00276_sample 13_preparation C1909.6991
GSM187739PAD_00277_sample 14_preparation C1012.2485
GSM187742PAD_00278_sample 15_preparation C2361.7793
GSM187745PAD_00279_sample 16_preparation C4.280874
GSM187748PAD_00296_sample 17_preparation C86.612546
GSM187751PAD_00297_sample 18_preparation C58.128640
GSM187754PAD_00298_sample 19_preparation C28.568225
GSM187757PAD_00299_sample 20_preparation C13.524417
GSM187760PAD_00300_sample 21_preparation C64.408940
GSM187763PAD_00301_sample 22_preparation C1075.7986
GSM187766PAD_00302_sample 23_preparation C30.369926
GSM187769PAD_00303_sample 24_preparation C424.26373
GSM187777PAD_00310_sample 25_preparation C_replicate 185.59145
GSM187778PAD_00311_sample 25_preparation C_replicate 215.901415
GSM187779PAD_00332_sample 25_preparation C_replicate 3119.93348
GSM187785PAD_00320_sample 26_preparation C_replicate 1134.3555
GSM187786PAD_00321_sample 26_preparation C_replicate 249.422733
GSM187787PAD_00319_sample 26_preparation C_replicate 313.007713
GSM187794PAD_00328_sample 27_preparation C_replicate 1683.80381
GSM187795PAD_00329_sample 27_preparation C_replicate 2359.24772
GSM187796PAD_00330_sample 27_preparation C_replicate 3598.42779