ProfileGDS2819 / 1553258_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 17% 40% 37% 22% 13% 7% 28% 16% 10% 34% 5% 7% 14% 17% 15% 14% 36% 45% 19% 49% 15% 17% 15% 18% 4% 5% 17% 53% 6% 19% 34% 7% 25% 11% 17% 4% 8% 5% 7% 18% 6% 42% 53% 32% 19% 21% 25% 37% 22% 55% 21% 18% 46% 46% 19% 25% 15% 13% 9% 4% 17% 20% 18% 4% 38% 17% 28% 38% 7% 14% 14% 11% 19% 19% 35% 45% 21% 37% 11% 20% 35% 41% 12% 8% 5% 8% 11% 18% 33% 42% 25% 56% 31% 10% 28% 28% 13% 53% 7% sort by protocol sort by individual sort by disease state Gene Expression Profile
Graph caption help
SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A20.033917
GSM187701PAD_00233_sample 2_preparation A77.314840
GSM187704PAD_00234_sample 3_preparation A80.525937
GSM187707PAD_00331_sample 4_preparation A25.013522
GSM187710PAD_00236_sample 5_preparation A9.1401713
GSM187713PAD_00237_sample 6_preparation A6.247847
GSM187716PAD_00238_sample 7_preparation A30.539828
GSM187719PAD_00239_sample 8_preparation A25.702216
GSM187722PAD_00256_sample 9_preparation A8.0460410
GSM187725PAD_00257_sample 10_preparation A51.710134
GSM187728PAD_00258_sample 11_preparation A4.910565
GSM187731PAD_00259_sample 12_preparation A7.90397
GSM187734PAD_00260_sample 13_preparation A16.261114
GSM187737PAD_00261_sample 14_preparation A21.579717
GSM187740PAD_00262_sample 15_preparation A12.020415
GSM187743PAD_00263_sample 16_preparation A9.0297314
GSM187746PAD_00280_sample 17_preparation A55.586936
GSM187749PAD_00281_sample 18_preparation A80.037245
GSM187752PAD_00282_sample 19_preparation A18.776619
GSM187755PAD_00283_sample 20_preparation A114.99949
GSM187758PAD_00284_sample 21_preparation A12.167815
GSM187761PAD_00285_sample 22_preparation A17.642817
GSM187764PAD_00286_sample 23_preparation A14.621715
GSM187767PAD_00287_sample 24_preparation A14.431518
GSM187770PAD_00304_sample 25_preparation A_replicate 16.289144
GSM187771PAD_00305_sample 25_preparation A_replicate 26.962525
GSM187772PAD_00306_sample 25_preparation A_replicate 316.481217
GSM187780PAD_00313_sample 26_preparation A_replicate 1112.58753
GSM187781PAD_00314_sample 26_preparation A_replicate 28.08356
GSM187782PAD_00315_sample 26_preparation A_replicate 316.846419
GSM187788PAD_00322_sample 27_preparation A_replicate 151.635534
GSM187789PAD_00323_sample 27_preparation A_replicate 28.644157
GSM187790PAD_00324_sample 27_preparation A_replicate 332.811825
GSM187699PAD_00240_sample 1_preparation B9.2525711
GSM187702PAD_00241_sample 2_preparation B15.551217
GSM187705PAD_00242_sample 3_preparation B4.58064
GSM187708PAD_00243_sample 4_preparation B7.615038
GSM187711PAD_00244_sample 5_preparation B4.987345
GSM187714PAD_00245_sample 6_preparation B7.011347
GSM187717PAD_00246_sample 7_preparation B18.774218
GSM187720PAD_00247_sample 8_preparation B10.69456
GSM187723PAD_00264_sample 9_preparation B99.730642
GSM187726PAD_00340_sample 10_preparation B216.52753
GSM187729PAD_00266_sample 11_preparation B47.558432
GSM187732PAD_00267_sample 12_preparation B23.304219
GSM187735PAD_00268_sample 13_preparation B23.682821
GSM187738PAD_00269_sample 14_preparation B39.449325
GSM187741PAD_00270_sample 15_preparation B68.926937
GSM187744PAD_00271_sample 16_preparation B42.146322
GSM187747PAD_00288_sample 17_preparation B156.90855
GSM187750PAD_00289_sample 18_preparation B22.928221
GSM187753PAD_00290_sample 19_preparation B18.649918
GSM187756PAD_00291_sample 20_preparation B99.139646
GSM187759PAD_00292_sample 21_preparation B97.042846
GSM187762PAD_00293_sample 22_preparation B22.721419
GSM187765PAD_00294_sample 23_preparation B27.122825
GSM187768PAD_00295_sample 24_preparation B13.154315
GSM187773PAD_00307_sample 25_preparation B_replicate 114.963413
GSM187774PAD_00308_sample 25_preparation B_replicate 213.10899
GSM187775PAD_00309_sample 25_preparation B_replicate 36.396684
GSM187776PAD_00333_sample 25_preparation B_replicate 321.999117
GSM187783PAD_00316_sample 26_preparation B_replicate 122.648120
GSM187784PAD_00317_sample 26_preparation B_replicate 221.62218
GSM187791PAD_00325_sample 27_preparation B_replicate 16.047124
GSM187792PAD_00326_sample 27_preparation B_replicate 266.046938
GSM187793PAD_00327_sample 27_preparation B_replicate 316.389617
GSM187700PAD_00248_sample 1_preparation C40.825628
GSM187703PAD_00249_sample 2_preparation C61.645538
GSM187706PAD_00250_sample 3_preparation C11.60237
GSM187709PAD_00251_sample 4_preparation C17.883214
GSM187712PAD_00252_sample 5_preparation C13.229714
GSM187715PAD_00253_sample 6_preparation C15.249211
GSM187718PAD_00254_sample 7_preparation C20.732319
GSM187721PAD_00255_sample 8_preparation C22.097519
GSM187724PAD_00272_sample 9_preparation C63.193635
GSM187727PAD_00273_sample 10_preparation C87.187445
GSM187730PAD_00274_sample 11_preparation C20.364521
GSM187733PAD_00275_sample 12_preparation C54.42337
GSM187736PAD_00276_sample 13_preparation C10.344711
GSM187739PAD_00277_sample 14_preparation C24.720220
GSM187742PAD_00278_sample 15_preparation C56.165335
GSM187745PAD_00279_sample 16_preparation C62.858741
GSM187748PAD_00296_sample 17_preparation C10.705912
GSM187751PAD_00297_sample 18_preparation C5.985778
GSM187754PAD_00298_sample 19_preparation C5.992545
GSM187757PAD_00299_sample 20_preparation C6.67388
GSM187760PAD_00300_sample 21_preparation C10.333211
GSM187763PAD_00301_sample 22_preparation C18.885818
GSM187766PAD_00302_sample 23_preparation C46.8733
GSM187769PAD_00303_sample 24_preparation C84.841742
GSM187777PAD_00310_sample 25_preparation C_replicate 129.590525
GSM187778PAD_00311_sample 25_preparation C_replicate 2141.73356
GSM187779PAD_00332_sample 25_preparation C_replicate 355.578731
GSM187785PAD_00320_sample 26_preparation C_replicate 111.976210
GSM187786PAD_00321_sample 26_preparation C_replicate 237.447728
GSM187787PAD_00319_sample 26_preparation C_replicate 336.070528
GSM187794PAD_00328_sample 27_preparation C_replicate 111.962513
GSM187795PAD_00329_sample 27_preparation C_replicate 2137.89453
GSM187796PAD_00330_sample 27_preparation C_replicate 37.85157