ProfileGDS2819 / 1553071_a_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 19% 26% 29% 19% 34% 49% 13% 50% 28% 43% 32% 5% 15% 8% 47% 48% 8% 7% 25% 53% 24% 25% 7% 25% 10% 15% 32% 43% 7% 7% 45% 7% 27% 26% 16% 32% 20% 6% 19% 8% 11% 25% 56% 20% 36% 9% 9% 17% 38% 7% 16% 42% 58% 6% 16% 19% 16% 18% 14% 32% 15% 51% 6% 23% 4% 34% 58% 27% 33% 23% 14% 21% 21% 22% 35% 12% 18% 20% 9% 34% 44% 7% 15% 17% 18% 10% 23% 32% 24% 16% 11% 13% 17% 31% 27% 21% 41% 20% 36% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A21.147719
GSM187701PAD_00233_sample 2_preparation A37.698626
GSM187704PAD_00234_sample 3_preparation A51.104729
GSM187707PAD_00331_sample 4_preparation A19.604619
GSM187710PAD_00236_sample 5_preparation A38.864434
GSM187713PAD_00237_sample 6_preparation A82.403549
GSM187716PAD_00238_sample 7_preparation A9.8383913
GSM187719PAD_00239_sample 8_preparation A135.76950
GSM187722PAD_00256_sample 9_preparation A34.498728
GSM187725PAD_00257_sample 10_preparation A75.486343
GSM187728PAD_00258_sample 11_preparation A43.565432
GSM187731PAD_00259_sample 12_preparation A6.372775
GSM187734PAD_00260_sample 13_preparation A17.676915
GSM187737PAD_00261_sample 14_preparation A11.39078
GSM187740PAD_00262_sample 15_preparation A81.568147
GSM187743PAD_00263_sample 16_preparation A70.463148
GSM187746PAD_00280_sample 17_preparation A8.54428
GSM187749PAD_00281_sample 18_preparation A7.904317
GSM187752PAD_00282_sample 19_preparation A27.107125
GSM187755PAD_00283_sample 20_preparation A129.94953
GSM187758PAD_00284_sample 21_preparation A22.966124
GSM187761PAD_00285_sample 22_preparation A31.254625
GSM187764PAD_00286_sample 23_preparation A8.681967
GSM187767PAD_00287_sample 24_preparation A25.33525
GSM187770PAD_00304_sample 25_preparation A_replicate 110.71510
GSM187771PAD_00305_sample 25_preparation A_replicate 215.620815
GSM187772PAD_00306_sample 25_preparation A_replicate 344.283832
GSM187780PAD_00313_sample 26_preparation A_replicate 172.832943
GSM187781PAD_00314_sample 26_preparation A_replicate 28.650567
GSM187782PAD_00315_sample 26_preparation A_replicate 37.183047
GSM187788PAD_00322_sample 27_preparation A_replicate 184.935345
GSM187789PAD_00323_sample 27_preparation A_replicate 28.227817
GSM187790PAD_00324_sample 27_preparation A_replicate 335.934227
GSM187699PAD_00240_sample 1_preparation B30.168226
GSM187702PAD_00241_sample 2_preparation B13.844516
GSM187705PAD_00242_sample 3_preparation B49.18832
GSM187708PAD_00243_sample 4_preparation B21.311220
GSM187711PAD_00244_sample 5_preparation B5.577986
GSM187714PAD_00245_sample 6_preparation B19.337819
GSM187717PAD_00246_sample 7_preparation B8.057128
GSM187720PAD_00247_sample 8_preparation B14.925111
GSM187723PAD_00264_sample 9_preparation B41.989725
GSM187726PAD_00340_sample 10_preparation B242.85856
GSM187729PAD_00266_sample 11_preparation B20.550320
GSM187732PAD_00267_sample 12_preparation B67.264536
GSM187735PAD_00268_sample 13_preparation B9.116959
GSM187738PAD_00269_sample 14_preparation B13.63589
GSM187741PAD_00270_sample 15_preparation B19.392917
GSM187744PAD_00271_sample 16_preparation B104.63438
GSM187747PAD_00288_sample 17_preparation B10.03677
GSM187750PAD_00289_sample 18_preparation B15.348616
GSM187753PAD_00290_sample 19_preparation B80.080242
GSM187756PAD_00291_sample 20_preparation B163.50858
GSM187759PAD_00292_sample 21_preparation B8.326696
GSM187762PAD_00293_sample 22_preparation B18.350816
GSM187765PAD_00294_sample 23_preparation B17.267919
GSM187768PAD_00295_sample 24_preparation B14.273516
GSM187773PAD_00307_sample 25_preparation B_replicate 121.215618
GSM187774PAD_00308_sample 25_preparation B_replicate 218.414914
GSM187775PAD_00309_sample 25_preparation B_replicate 351.454632
GSM187776PAD_00333_sample 25_preparation B_replicate 319.727315
GSM187783PAD_00316_sample 26_preparation B_replicate 1116.06551
GSM187784PAD_00317_sample 26_preparation B_replicate 28.992126
GSM187791PAD_00325_sample 27_preparation B_replicate 127.965323
GSM187792PAD_00326_sample 27_preparation B_replicate 25.96054
GSM187793PAD_00327_sample 27_preparation B_replicate 354.584734
GSM187700PAD_00248_sample 1_preparation C162.9358
GSM187703PAD_00249_sample 2_preparation C34.440627
GSM187706PAD_00250_sample 3_preparation C63.442233
GSM187709PAD_00251_sample 4_preparation C30.455123
GSM187712PAD_00252_sample 5_preparation C13.652614
GSM187715PAD_00253_sample 6_preparation C29.542921
GSM187718PAD_00254_sample 7_preparation C22.653521
GSM187721PAD_00255_sample 8_preparation C26.928722
GSM187724PAD_00272_sample 9_preparation C62.592535
GSM187727PAD_00273_sample 10_preparation C10.589912
GSM187730PAD_00274_sample 11_preparation C14.815418
GSM187733PAD_00275_sample 12_preparation C17.636120
GSM187736PAD_00276_sample 13_preparation C8.919859
GSM187739PAD_00277_sample 14_preparation C61.172934
GSM187742PAD_00278_sample 15_preparation C84.821244
GSM187745PAD_00279_sample 16_preparation C5.718537
GSM187748PAD_00296_sample 17_preparation C13.034115
GSM187751PAD_00297_sample 18_preparation C13.082517
GSM187754PAD_00298_sample 19_preparation C17.498918
GSM187757PAD_00299_sample 20_preparation C7.6611410
GSM187760PAD_00300_sample 21_preparation C23.872223
GSM187763PAD_00301_sample 22_preparation C52.761732
GSM187766PAD_00302_sample 23_preparation C26.043524
GSM187769PAD_00303_sample 24_preparation C17.411916
GSM187777PAD_00310_sample 25_preparation C_replicate 111.009711
GSM187778PAD_00311_sample 25_preparation C_replicate 213.079713
GSM187779PAD_00332_sample 25_preparation C_replicate 323.079617
GSM187785PAD_00320_sample 26_preparation C_replicate 146.274231
GSM187786PAD_00321_sample 26_preparation C_replicate 234.705327
GSM187787PAD_00319_sample 26_preparation C_replicate 323.322521
GSM187794PAD_00328_sample 27_preparation C_replicate 173.136141
GSM187795PAD_00329_sample 27_preparation C_replicate 223.733720
GSM187796PAD_00330_sample 27_preparation C_replicate 356.188936