ProfileGDS2819 / 1553070_a_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 61% 48% 18% 46% 54% 20% 54% 21% 42% 48% 9% 32% 60% 48% 24% 61% 55% 55% 57% 51% 40% 64% 64% 33% 49% 36% 52% 46% 26% 44% 58% 47% 51% 45% 50% 42% 35% 35% 55% 59% 25% 57% 68% 45% 43% 46% 25% 41% 23% 47% 43% 4% 46% 29% 59% 56% 29% 27% 56% 39% 68% 13% 48% 41% 50% 59% 47% 59% 12% 20% 56% 60% 65% 6% 50% 50% 50% 50% 38% 44% 13% 40% 50% 63% 57% 52% 23% 50% 58% 23% 41% 52% 54% 63% 29% 57% 51% 68% 43% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A164.70561
GSM187701PAD_00233_sample 2_preparation A112.06748
GSM187704PAD_00234_sample 3_preparation A27.88118
GSM187707PAD_00331_sample 4_preparation A91.45746
GSM187710PAD_00236_sample 5_preparation A99.655654
GSM187713PAD_00237_sample 6_preparation A16.405620
GSM187716PAD_00238_sample 7_preparation A103.08954
GSM187719PAD_00239_sample 8_preparation A33.611821
GSM187722PAD_00256_sample 9_preparation A67.561142
GSM187725PAD_00257_sample 10_preparation A95.210148
GSM187728PAD_00258_sample 11_preparation A7.05499
GSM187731PAD_00259_sample 12_preparation A39.952732
GSM187734PAD_00260_sample 13_preparation A162.13860
GSM187737PAD_00261_sample 14_preparation A109.21648
GSM187740PAD_00262_sample 15_preparation A24.295524
GSM187743PAD_00263_sample 16_preparation A138.67461
GSM187746PAD_00280_sample 17_preparation A132.66655
GSM187749PAD_00281_sample 18_preparation A124.42655
GSM187752PAD_00282_sample 19_preparation A139.11557
GSM187755PAD_00283_sample 20_preparation A120.02551
GSM187758PAD_00284_sample 21_preparation A57.271540
GSM187761PAD_00285_sample 22_preparation A229.56164
GSM187764PAD_00286_sample 23_preparation A183.70664
GSM187767PAD_00287_sample 24_preparation A41.527333
GSM187770PAD_00304_sample 25_preparation A_replicate 1106.37649
GSM187771PAD_00305_sample 25_preparation A_replicate 259.53136
GSM187772PAD_00306_sample 25_preparation A_replicate 3117.58952
GSM187780PAD_00313_sample 26_preparation A_replicate 184.457446
GSM187781PAD_00314_sample 26_preparation A_replicate 231.226926
GSM187782PAD_00315_sample 26_preparation A_replicate 368.793944
GSM187788PAD_00322_sample 27_preparation A_replicate 1147.07358
GSM187789PAD_00323_sample 27_preparation A_replicate 293.446747
GSM187790PAD_00324_sample 27_preparation A_replicate 3113.05651
GSM187699PAD_00240_sample 1_preparation B82.494245
GSM187702PAD_00241_sample 2_preparation B110.10950
GSM187705PAD_00242_sample 3_preparation B77.65842
GSM187708PAD_00243_sample 4_preparation B56.444835
GSM187711PAD_00244_sample 5_preparation B53.417835
GSM187714PAD_00245_sample 6_preparation B135.82455
GSM187717PAD_00246_sample 7_preparation B157.80159
GSM187720PAD_00247_sample 8_preparation B37.313225
GSM187723PAD_00264_sample 9_preparation B184.62657
GSM187726PAD_00340_sample 10_preparation B398.83868
GSM187729PAD_00266_sample 11_preparation B92.790145
GSM187732PAD_00267_sample 12_preparation B92.363443
GSM187735PAD_00268_sample 13_preparation B92.853946
GSM187738PAD_00269_sample 14_preparation B39.692225
GSM187741PAD_00270_sample 15_preparation B82.668841
GSM187744PAD_00271_sample 16_preparation B45.742423
GSM187747PAD_00288_sample 17_preparation B114.42747
GSM187750PAD_00289_sample 18_preparation B80.012643
GSM187753PAD_00290_sample 19_preparation B6.264834
GSM187756PAD_00291_sample 20_preparation B99.977846
GSM187759PAD_00292_sample 21_preparation B42.186729
GSM187762PAD_00293_sample 22_preparation B197.01959
GSM187765PAD_00294_sample 23_preparation B129.78556
GSM187768PAD_00295_sample 24_preparation B38.44729
GSM187773PAD_00307_sample 25_preparation B_replicate 139.212227
GSM187774PAD_00308_sample 25_preparation B_replicate 2178.21656
GSM187775PAD_00309_sample 25_preparation B_replicate 375.345639
GSM187776PAD_00333_sample 25_preparation B_replicate 3298.14868
GSM187783PAD_00316_sample 26_preparation B_replicate 114.604113
GSM187784PAD_00317_sample 26_preparation B_replicate 2113.91948
GSM187791PAD_00325_sample 27_preparation B_replicate 180.415541
GSM187792PAD_00326_sample 27_preparation B_replicate 2110.38850
GSM187793PAD_00327_sample 27_preparation B_replicate 3168.73459
GSM187700PAD_00248_sample 1_preparation C102.64847
GSM187703PAD_00249_sample 2_preparation C173.10559
GSM187706PAD_00250_sample 3_preparation C17.321412
GSM187709PAD_00251_sample 4_preparation C25.551320
GSM187712PAD_00252_sample 5_preparation C145.61556
GSM187715PAD_00253_sample 6_preparation C188.94360
GSM187718PAD_00254_sample 7_preparation C210.88965
GSM187721PAD_00255_sample 8_preparation C9.115226
GSM187724PAD_00272_sample 9_preparation C119.98950
GSM187727PAD_00273_sample 10_preparation C109.60750
GSM187730PAD_00274_sample 11_preparation C100.14150
GSM187733PAD_00275_sample 12_preparation C97.35250
GSM187736PAD_00276_sample 13_preparation C61.612738
GSM187739PAD_00277_sample 14_preparation C95.552344
GSM187742PAD_00278_sample 15_preparation C13.121213
GSM187745PAD_00279_sample 16_preparation C61.346940
GSM187748PAD_00296_sample 17_preparation C106.77650
GSM187751PAD_00297_sample 18_preparation C208.69363
GSM187754PAD_00298_sample 19_preparation C151.03557
GSM187757PAD_00299_sample 20_preparation C99.959752
GSM187760PAD_00300_sample 21_preparation C24.168923
GSM187763PAD_00301_sample 22_preparation C119.67650
GSM187766PAD_00302_sample 23_preparation C136.1758
GSM187769PAD_00303_sample 24_preparation C29.29623
GSM187777PAD_00310_sample 25_preparation C_replicate 171.216541
GSM187778PAD_00311_sample 25_preparation C_replicate 2120.07352
GSM187779PAD_00332_sample 25_preparation C_replicate 3148.96154
GSM187785PAD_00320_sample 26_preparation C_replicate 1189.94363
GSM187786PAD_00321_sample 26_preparation C_replicate 239.619929
GSM187787PAD_00319_sample 26_preparation C_replicate 3139.0857
GSM187794PAD_00328_sample 27_preparation C_replicate 1110.21451
GSM187795PAD_00329_sample 27_preparation C_replicate 2288.34568
GSM187796PAD_00330_sample 27_preparation C_replicate 377.417743