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Sample GSM994861 Query DataSets for GSM994861
Status Public on Nov 01, 2012
Title Dendritic cells BDCA1 donor4
Sample type RNA
 
Source name Healthy donor4
Organism Homo sapiens
Characteristics cell: primary cells
cell population: Dendritic cells BDCA1
Extracted molecule total RNA
Extraction protocol RNA was extracted using Rneasy Microquit (Qiagen).
Label biotin
Label protocol 100 ng of polysomal-bound RNA were employed to synthesize double-stranded cDNA using 2 successive reverse-transcription reactions according to the std affymetrix protocol
 
Hybridization protocol Labelled DNA was hybrized on the Affymetrix Human Gene 1.1 ST processed on an Affymetrix GeneTitan device.
Scan protocol Array scanning was performed according to the manufacturer's instruction (Affymetrix)
Description RMA expression value derived from Genesprings GX 7.3 (Agilent)
Data processing Statistical analysis were performed using GenSpring GX 7.3 (Agilent). Expression data was normalized using the RMA algorithm. Probes with an expression lower than 25 Units were filtered out.
 
Submission date Aug 30, 2012
Last update date Nov 01, 2012
Contact name Maxime Touzot
E-mail(s) [email protected]
Organization name Institut Curie
Lab U932
Street address 26 rue d'ULM
City PAris
ZIP/Postal code 75005
Country France
 
Platform ID GPL11532
Series (1)
GSE40484 Human inflammatory dendritic cells induce Th17 differentiation

Data table header descriptions
ID_REF
VALUE log(2) RMA

Data table
ID_REF VALUE
7892501 5.945532
7892502 7.806544
7892503 3.26763
7892504 7.88178
7892505 3.995014
7892506 7.056931
7892507 3.373377
7892508 8.417536
7892509 10.54008
7892510 6.635868
7892511 5.882404
7892512 5.05123
7892513 5.702496
7892514 10.17706
7892515 8.883369
7892516 4.078572
7892517 7.339339
7892518 3.450293
7892519 6.125258
7892520 8.4661

Total number of rows: 33297

Table truncated, full table size 549 Kbytes.




Supplementary file Size Download File type/resource
GSM994861_IS09_ARN0022_s1h1_F09_hGene.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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