|
| Status |
Public on Nov 01, 2012 |
| Title |
RNA from SW1990 cell line |
| Sample type |
genomic |
| |
|
| Source name |
SW1990
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: SW1990
gender: male
sample type: pancreatic adenocarcinoma
disease state: cancer
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
RNA was extracted from all cell lines using Trizol reagent
|
| Label |
Cy3
|
| Label protocol |
Standard agilent protocol (linear amplificiation to generate cRNA labeled with Cy3)
|
| |
|
| Hybridization protocol |
One-Color microarray-based gene expression protocol
|
| Scan protocol |
Arrays were imaged using an Axon GenePix 4000B scanner
|
| Description |
pancreatic cancer cell line
|
| Data processing |
array data were spot-found using GenePix 6.1 and normalized by median array normalization
|
| |
|
| Submission date |
Aug 14, 2012 |
| Last update date |
Nov 01, 2012 |
| Contact name |
Kelsie L Thu |
| Organization name |
BC Cancer Research Centre
|
| Street address |
675 West 10th Avenue
|
| City |
Vancouver |
| State/province |
British Columbia |
| ZIP/Postal code |
V5Z 1L3 |
| Country |
Canada |
| |
|
| Platform ID |
GPL6480 |
| Series (2) |
| GSE40098 |
RNA expression analysis of pancreatic cancer and non-malignant pancreas cell lines |
| GSE40099 |
Pancreatic cancer and non-malignant pancreas cell lines |
|
