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Sample GSM97627 Query DataSets for GSM97627
Status Public on Apr 29, 2009
Title cochlear perilymph stimulated PBMC of AIED patient #2
Sample type RNA
 
Source name cochlear perilymph stimulated PBMC of AIED patient
Organism Homo sapiens
Characteristics autologous cochlear stimulated PBMC of AIED patient #2
Biomaterial provider A. Vambutas
Treatment protocol 16 hour culture with stimulation with autologous perilymph
Extracted molecule total RNA
Extraction protocol affinity spin column
Label biotin
Label protocol Enzo protocol
 
Hybridization protocol Affymetrix protocol to HG-U133A 2.0
Description AIED patient 2 PBMC stimulated with autologous perilymph
Data processing Affymetrix
 
Submission date Feb 20, 2006
Last update date Apr 24, 2009
Contact name Andrea Vambutas
E-mail(s) [email protected]
Phone 718-470-7955
Fax 718-470-4281
Organization name Long Island Jewish Medical Center
Department Otolaryngology
Street address 430 Lakeville Road
City New Hyde Park
State/province NY
ZIP/Postal code 11042
Country USA
 
Platform ID GPL571
Series (1)
GSE4277 IL1R2 and glucocorticoid responsiveness in patients with AIED

Data table header descriptions
ID_REF
VALUE VALUE OF COCHLEAR STIMULATED PBMC FROM AIED PATIENT #2
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2779.4 P 0.000446
AFFX-BioB-M_at 3994.1 P 0.000044
AFFX-BioB-3_at 2774.1 P 0.00007
AFFX-BioC-5_at 8881 P 0.000052
AFFX-BioC-3_at 12743 P 0.000044
AFFX-BioDn-5_at 20690.5 P 0.000044
AFFX-BioDn-3_at 56408 P 0.000052
AFFX-CreX-5_at 107921 P 0.000052
AFFX-CreX-3_at 130579.2 P 0.000044
AFFX-DapX-5_at 186.7 A 0.262827
AFFX-DapX-M_at 42 A 0.760937
AFFX-DapX-3_at 14.6 A 0.953533
AFFX-LysX-5_at 45.2 A 0.455409
AFFX-LysX-M_at 31.5 A 0.883908
AFFX-LysX-3_at 18.5 A 0.772364
AFFX-PheX-5_at 13.5 A 0.957038
AFFX-PheX-M_at 22.4 A 0.814869
AFFX-PheX-3_at 90.6 A 0.58862
AFFX-ThrX-5_at 27.4 A 0.891021
AFFX-ThrX-M_at 31.3 A 0.876428

Total number of rows: 22277

Table truncated, full table size 602 Kbytes.




Supplementary data files not provided

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