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Sample GSM96227 Query DataSets for GSM96227
Status Public on Feb 10, 2006
Title MamGland normal dietary fat replicate3 PD17
Sample type RNA
 
Source name Mammary Gland
Organism Mus musculus
Characteristics Wild type, Pregnant Day 17 whole mammary gland less Lymph node
Extracted molecule total RNA
Extraction protocol Excised tissue was stored in RNALater and then polytron homogenized and lysed as individual samples in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
Label ENZO biotin labeled
Label protocol Approximately 5 micrograms of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Wildtype FVB mouse mammary tissue, normal dietary fat
Data processing GeneSpring version 7.2 GC-RMA processing
 
Submission date Feb 08, 2006
Last update date Jun 06, 2022
Contact name Michael C. Rudolph
E-mail(s) [email protected]
Organization name OUHSC
Department Physiology
Lab Rudolph Lab
Street address 975 NE 10th St. BRC North rm 364
City Oklahoma City
State/province OK
ZIP/Postal code 73104
Country USA
 
Platform ID GPL81
Series (1)
GSE4222 Metabolic regulation in the lactating mammary gland:A lipid synthesizing machine

Data table header descriptions
ID_REF affymetrix probe ID from Mu74Av2 array
VALUE GeneSpring v.7.2 GC-RMA calculations

Data table
ID_REF VALUE
100001_at 21.257805
100002_at 5.200597
100003_at 5.631097
100004_at 16.268887
100005_at 73.95486
100006_at 10.990794
100007_at 60.739143
100009_r_at 8.004693
100010_at 69.104416
100011_at 159.53232
100012_at 68.12615
100013_at 116.84642
100014_at 49.181725
100015_at 69.95882
100016_at 10.202232
100017_at 11.241126
100018_at 28.786793
100019_at 10.101378
100020_at 62.44034
100021_at 16.214306

Total number of rows: 12488

Table truncated, full table size 239 Kbytes.




Supplementary data files not provided

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