NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM93189 Query DataSets for GSM93189
Status Public on Jul 01, 2006
Title DMSO-treated, 24h after UV, Replicate A
Sample type RNA
 
Source name dorsal mouse skin
Organism Mus musculus
Characteristics DMSO-treated, sham UV exposed
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from the shaved dorsal skin using Trizol (Invitrogen) followed by RNeasy kit (Qiagen).
Label biotin
Label protocol 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description DMSO-treated, harvested 24h after UV exposure
Data processing Robust Multichip Average (RMA) of Affymetrix CEL file
 
Submission date Jan 18, 2006
Last update date Jan 19, 2006
Contact name Laura A Hansen
E-mail(s) [email protected]
Phone 402-280-4085
Fax 402-280-2690
Organization name Creighton University School of Medicine
Department Biomedical Sciences
Street address 2500 California Plaza
City Omaha
State/province NE
ZIP/Postal code 68178
Country USA
 
Platform ID GPL339
Series (1)
GSE4066 Erbb2 regulates inflammation and proliferation in the skin after ultraviolet irradiation.

Data table header descriptions
ID_REF
VALUE RMA-calculated Signal intensity

Data table
ID_REF VALUE
1449898_at 7.480793
1423472_at 11.467703
1423473_at 4.05751
1448729_a_at 7.519206
1452357_at 7.967337
1420876_a_at 5.331796
1420877_at 5.425114
1424181_at 6.814436
1431973_at 6.772659
1436819_at 5.311973
1460286_at 4.97521
1454610_at 11.113417
1426802_at 8.421515
1417038_at 9.996825
1448903_at 10.651383
1427722_at 4.029147
1419072_at 6.229717
1425946_at 7.326193
1434906_at 5.504312
1416980_at 7.155446

Total number of rows: 19645

Table truncated, full table size 391 Kbytes.




Supplementary file Size Download File type/resource
GSM93189.CEL.gz 3.5 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap