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Sample GSM93179 Query DataSets for GSM93179
Status Public on Jul 01, 2006
Title DMSO-treated, Sham UV, Replicate C
Sample type RNA
 
Source name dorsal mouse skin
Organism Mus musculus
Characteristics DMSO-treated, sham UV exposed
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from the shaved dorsal skin using Trizol (Invitrogen) followed by RNeasy kit (Qiagen).
Label biotin
Label protocol 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description DMSO-treated, harvested 6h after Sham UV exposure
Data processing Robust Multichip Average (RMA) of Affymetrix CEL file
 
Submission date Jan 18, 2006
Last update date Jan 19, 2006
Contact name Laura A Hansen
E-mail(s) [email protected]
Phone 402-280-4085
Fax 402-280-2690
Organization name Creighton University School of Medicine
Department Biomedical Sciences
Street address 2500 California Plaza
City Omaha
State/province NE
ZIP/Postal code 68178
Country USA
 
Platform ID GPL339
Series (1)
GSE4066 Erbb2 regulates inflammation and proliferation in the skin after ultraviolet irradiation.

Data table header descriptions
ID_REF
VALUE RMA-calculated Signal intensity

Data table
ID_REF VALUE
1449898_at 7.469934
1423472_at 11.110556
1423473_at 3.879313
1448729_a_at 6.903795
1452357_at 8.745831
1420876_a_at 5.348253
1420877_at 5.349923
1424181_at 6.429076
1431973_at 6.903456
1436819_at 5.239117
1460286_at 5.015404
1454610_at 10.893386
1426802_at 8.550638
1417038_at 9.713031
1448903_at 10.268568
1427722_at 3.929717
1419072_at 6.314582
1425946_at 7.256029
1434906_at 5.586231
1416980_at 7.144475

Total number of rows: 19645

Table truncated, full table size 391 Kbytes.




Supplementary file Size Download File type/resource
GSM93179.CEL.gz 3.5 Mb (ftp)(http) CEL

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