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GEO accession:
Sample GSM85622
Query DataSets for GSM85622
Status
Public on Nov 21, 2006
Title
NLP-1
Sample type
SAGE
Anchor
NlaIII
Tag Count
66214
Tag Length
10
Source name
lung parenchyma
Organism
Homo sapiens
Characteristics
lung parenchyma pooled from 4 individuals
Extracted molecule
polyA RNA
Description
lung parenchyma pooled from 4 individuals
Submission date
Nov 30, 2005
Last update date
Nov 19, 2008
Contact name
Kim Marie Lonergan
E-mail(s)
[email protected]
Phone
604-675-8111
Fax
604-675-8185
Organization name
British Columbia Cancer Research Centre
Department
Cancer Genetics and Developmental Biology
Lab
Dr. Wan L Lam
Street address
675 West 10th Avenue
City
Vancouver
State/province
British Columbia
ZIP/Postal code
V5Z 1L3
Country
Canada
Platform ID
GPL4
Series (2)
GSE3708
Expression profiling of normal lung parenchyma
GSE3754
Identification of novel lung genes in bronchial epithelium by serial analysis of gene expression
Data table header descriptions
TAG
10 nucleotide unique SAGE tag sequence
COUNT
raw tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CTCCCAGCCA
1379
20826.41
GTTCACATTA
884
13350.65
GAAATAAAGC
826
12474.70
GCCGTGAGCA
629
9499.50
ATAATTCTTT
590
8910.50
TTGGGGTTTC
464
7007.58
CCCATCGTCC
450
6796.15
GAAATACAGT
434
6554.51
TAATAAAGGT
370
5587.94
GTTGTGGTTA
367
5542.63
TTCAATAAAA
365
5512.43
CGCAGCGGGT
334
5044.25
GGATTTGGCC
311
4696.89
AAGGGAGCAC
311
4696.89
GGGCATCTCT
297
4485.46
CTGGGTTAAT
280
4228.71
TAGGTTGTCT
278
4198.51
CACAAACGGT
277
4183.41
CACCTAATTG
274
4138.10
GAGGGAGTTT
272
4107.89
Total number of rows:
17846
Table truncated, full table size
333 Kbytes
.
Supplementary data files not provided
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