|
| Status |
Public on Nov 20, 2024 |
| Title |
ZT02_0307 |
| Sample type |
SRA |
| |
|
| Source name |
Brain
|
| Organism |
Drosophila melanogaster |
| Characteristics |
tissue: Brain
cell line: NA
cell type: clock neuron
genotype: Clk856-GAL4 R11B03-AD;VT002670-DBD > UAS-EGFP
|
| Extracted molecule |
polyA RNA |
| Extraction protocol |
Dynabeads Magnetic Beads were used to extract RNA for bulk sequencing
10X Chromium and smart-seq3
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic single cell |
| Library selection |
cDNA |
| Instrument model |
Illumina NextSeq 500 |
| |
|
| Description |
ZT02 collected on 20220307
single_cell_read_count.csv
|
| Data processing |
sequenging data were mapped to the genome by cellranger or STAR (bulk)
Assembly: dm6
Supplementary files format and content: mapped read counts or nomalized bulk seq data were included
|
| |
|
| Submission date |
Sep 02, 2024 |
| Last update date |
Nov 20, 2024 |
| Contact name |
Michael Rosbash |
| Organization name |
HHMI/Brandeis University
|
| Street address |
415 South street
|
| City |
Waltham |
| ZIP/Postal code |
02453 |
| Country |
USA |
| |
|
| Platform ID |
GPL19132 |
| Series (1) |
| GSE276175 |
Transcriptomic DN3 clock neuron subtypes regulate Drosophila sleep |
|
| Relations |
| BioSample |
SAMN43462292 |
| SRA |
SRX25933538 |
