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Sample GSM800329 Query DataSets for GSM800329
Status Public on Dec 05, 2012
Title 786-M1B
Sample type RNA
 
Source name 786-M1B
Organism Homo sapiens
Characteristics cell line: 1st generation metastatic derivative of 786-O renal cell carcinoma cell line
Growth protocol Standard tissue culture conditions.
Extracted molecule total RNA
Extraction protocol PrepEase RNA spin kit (USB)
Label biotin
Label protocol Standard Affymetrix protocol.
 
Hybridization protocol Standard Affymetrix protocol.
Scan protocol Standard Affymetrix protocol.
Description First generation metastatic derivative
786M1B_HG-U133A_2.CEL
Data processing GCRMA as implemented in the R-package gcrma using the default settings and custom CDF-file hs133av2hsentrezgcdf version 10.
 
Submission date Sep 22, 2011
Last update date Dec 05, 2012
Contact name Sakari Vanharanta
E-mail(s) [email protected]
Organization name University of Helsinki
Department Translational Cancer Medicine Program
Lab Vanharanta
Street address Haartmaninkatu 8
City Helsinki
ZIP/Postal code 00014
Country Finland
 
Platform ID GPL14604
Series (2)
GSE32295 Gene expression data from the 786-O renal cell carcinoma cell line and its metastatic derivatives.
GSE32299 Epigenetic expansion of VHL-HIF signal output drives multiorgan metastasis in renal cancer

Data table header descriptions
ID_REF
VALUE GCRMA signal

Data table
ID_REF VALUE
10_at 1.817134765
100_at 6.05659444
1000_at 12.36475254
10000_at 4.619613804
10001_at 8.677620867
10002_at 2.661478549
10003_at 2.485629689
10004_at 2.089446336
10005_at 7.827816142
10006_at 11.1921393
10007_at 10.3872995
10009_at 3.561965525
1001_at 1.957360974
10010_at 9.615620783
10013_at 4.012088104
10014_at 2.051973261
10015_at 12.07435481
10016_at 12.39903214
10017_at 2.189628839
10018_at 2.978044188

Total number of rows: 12023

Table truncated, full table size 239 Kbytes.




Supplementary file Size Download File type/resource
GSM800329.CEL.gz 2.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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