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| Status |
Public on Dec 10, 2023 |
| Title |
PAEC, PAH, 23 |
| Sample type |
SRA |
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| Source name |
Lung
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| Organism |
Rattus norvegicus |
| Characteristics |
strain: Sprague Dawley
tissue: Lung
cell type: Primary pulmonary artery endothelial cell
treatment: Monocrotaline PAH
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| Extracted molecule |
polyA RNA |
| Extraction protocol |
For details of cell isolation, please see Wertheim BM et al., PLoS One 2019 Feb 27;14(2):e0211909. doi: 10.1371/journal.pone.0211909. eCollection 2019. PMID 30811450, PMCID PMC6392245.
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| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina HiSeq 2500 |
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| Description |
S17
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| Data processing |
Sequence reads were trimmed for adaptor sequence/low-quality sequence.
Assembly: not provided
Supplementary files format and content: *.count.txt: Tab-delimited text files include read counts for each Sample.
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| Submission date |
Dec 15, 2022 |
| Last update date |
Dec 10, 2023 |
| Contact name |
Bradley Maron |
| E-mail(s) |
[email protected]
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| Phone |
401-261-5637
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| Organization name |
Brigham & Women's Hospital
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| Department |
Medicine
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| Street address |
77 Avenue Louis Pasteur
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| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
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| Platform ID |
GPL18694 |
| Series (1) |
| GSE221097 |
Transcriptomic profile of CD31 and Griffonia simplicifolia isolectin B4 positive pulmonary artery endothelial cells isolated from a rat model of monocrotaline pulmonary arterial hypertension vs. control |
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| Relations |
| BioSample |
SAMN32253342 |
| SRA |
SRX18714538 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSM6845197_S17.count.txt.gz |
105.5 Kb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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