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Sample GSM667

Query DataSets for GSM667

Status

Public on Jan 09, 2002

Title

Mature B cells 11

Sample type

RNA

Source name

sorted Murine Bone marrow cells

Organism

Extracted molecule

total RNA

Description

B220hi sIgM+ Mature B cells sorted out of mouse bone marrow, sort no. 11

Submission date

Nov 28, 2001

Last update date

Mar 17, 2006

Contact name

Reinhard Hoffmann

E-mail(s)

[email protected]

Phone

+49-89-4140-4155

Organization name

Institute for medical microbiology

Street address

Trogerstr. 30

City

Munich

ZIP/Postal code

81675

Country

Germany

Platform ID

Series (2)

GSE13	Murine bone marrow B cell precursors
GSE272	T and B lymphocyte development profiles

Data table header descriptions
ID_REF
Experiment Name	Experiment name
Positive	number of poisitive probe pairs
Negative	number of negative probe pairs
Pairs	number of probe set specific probe pairs on the array
Pairs Used	number of unmasked probe pairs
Pairs InAvg	Trimmed probe pair set
Pos Fraction	Positive/Pairs Used
Log Avg	Log average
PM Excess	Number of probe pairs where PM/MM exceeds the ratio limit (10 by default)
MM Excess	Number of probe pairs where MM/PM exceeds 1/ratio limit (10 by default)
Pos/Neg	Positive/Negative
VALUE	Average difference intensity
ABS_CALL	Presence/absence call

Data table
ID_REF	Experiment Name	Positive	Negative	Pairs	Pairs Used	Pairs InAvg	Pos Fraction	Log Avg	PM Excess	MM Excess	Pos/Neg	VALUE	ABS_CALL
IL2_at	RHMu11MatA	4	4	19	19	18	0.21	0.15	0	0	1	27	A
IL10_at	RHMu11MatA	7	4	20	20	19	0.35	0.23	0	0	1.8	69	A
GMCSF_at	RHMu11MatA	4	6	20	20	18	0.2	0.53	0	0	0.7	183	A
TNFRII_at	RHMu11MatA	2	2	20	20	18	0.1	-0.25	0	0	1	6	A
MIP1-B_at	RHMu11MatA	8	4	20	20	18	0.4	0.35	0	1	2	513	A
IL4_at	RHMu11MatA	0	2	20	20	19	0	-0.11	0	0	0	-19	A
IL12_P40_at	RHMu11MatA	1	5	20	20	20	0.05	-0.68	0	0	0.2	-248	A
TNFa_at	RHMu11MatA	2	3	20	20	20	0.1	-0.03	0	0	0.7	-69	A
TCRa_at	RHMu11MatA	2	4	20	20	18	0.1	-0.96	0	0	0.5	-376	A
AFFX-BioB-5_at	RHMu11MatA	2	2	20	20	19	0.1	-0.04	0	0	1	-7	A
AFFX-BioB-M_at	RHMu11MatA	1	2	20	20	19	0.05	-0.24	0	0	0.5	-61	A
AFFX-BioB-3_at	RHMu11MatA	0	2	20	20	18	0	0.11	0	0	0	27	A
AFFX-BioC-5_at	RHMu11MatA	4	1	20	20	19	0.2	0.69	0	0	4	226	A
AFFX-BioC-3_at	RHMu11MatA	2	0	20	20	19	0.1	0.12	0	0	Undef	31	A
AFFX-BioDn-5_at	RHMu11MatA	2	1	20	20	20	0.1	0.28	0	0	2	74	A
AFFX-BioDn-3_at	RHMu11MatA	11	1	20	20	19	0.55	1.55	0	0	11	1893	P
AFFX-CreX-5_at	RHMu11MatA	16	0	20	20	19	0.8	3.76	0	0	Undef	2945	P
AFFX-CreX-3_at	RHMu11MatA	18	0	20	20	20	0.9	4.72	0	0	Undef	5710	P
AFFX-BioB-5_st	RHMu11MatA	7	4	20	20	20	0.35	0.75	0	0	1.8	224	A
AFFX-BioB-M_st	RHMu11MatA	5	3	20	20	17	0.25	1.05	0	0	1.7	124	A

Total number of rows: 6584

Table truncated, full table size 388 Kbytes.

Supplementary data files not provided

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