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Sample GSM665054 Query DataSets for GSM665054
Status Public on Oct 21, 2011
Title BT549 miR-181b Rep1
Sample type RNA
 
Channel 1
Source name BT549 miR-181b Overexpression Rep1
Organism Homo sapiens
Characteristics cell line: BT549
overexpression: miR-181b
Extracted molecule total RNA
Extraction protocol According to the manufacturer's protocol
Label Cy5
Label protocol According to the manufacturer's protocol
 
Channel 2
Source name BT549 miR-181b Control Overexpression Rep1
Organism Homo sapiens
Characteristics cell line: BT549
overexpression: control scrambled small RNA
Extracted molecule total RNA
Extraction protocol According to the manufacturer's protocol
Label Cy3
Label protocol According to the manufacturer's protocol
 
 
Hybridization protocol According to the manufacturer's protocol
Scan protocol Scanned on Agilent Technologies Scanner G2505B Images were quantified using Agilent Feature Extraction Software
Data processing LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Red signal/processed Green signal. Agilent software was used.
 
Submission date Feb 01, 2011
Last update date Oct 21, 2011
Contact name Christopher Maher
E-mail(s) [email protected]
Phone 734-764-3336
Organization name Michigan Center for Translational Pathology
Street address 1500 E. Medical Center Drive
City Ann Arbor
State/province MI
ZIP/Postal code 48105
Country USA
 
Platform ID GPL4133
Series (1)
GSE26996 Coordinated regulation of polycomb group complexes through microRNAs in cancer

Data table header descriptions
ID_REF
VALUE -INV_VALUE: LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Green signal/processed Red signal (test/reference)
INV_VALUE LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Red signal/processed Green signal

Data table
ID_REF VALUE INV_VALUE
12 0.515799 -0.515798835
13 1.87412 -1.874124419
14 0.312559 -0.312558897
15 -0.564149 0.564149124
16 0 0
17 0.208389 -0.208389445
18 0.436128 -0.436128434
19 -0.526188 0.526187862
20 0 0
21 0 0
22 -0.322687 0.32268656
23 0.425133 -0.425133104
24 0.297466 -0.297466171
26 0.296505 -0.29650488
27 0.567808 -0.567808267
28 0 0
29 0 0
30 0.408311 -0.408311048
31 0.574573 -0.574573075
32 0.0697068 -0.069706816

Total number of rows: 41000

Table truncated, full table size 926 Kbytes.




Supplementary file Size Download File type/resource
GSM665054_miR181b_1.txt.gz 14.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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