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GEO accession:
Sample GSM62704
Query DataSets for GSM62704
Status
Public on Jun 30, 2005
Title
arf6 arf8 flowers_stage 13-14
Sample type
RNA
Source name
flowers, stage 13-14
Organism
Arabidopsis thaliana
Characteristics
arf6 arf8 flowers, stage 13-14
Treatment protocol
untreated
Growth protocol
Plants were grown under long day conditions for 6 weeks
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted from frozen tissue using TRIzol reagent (Invitrogen)
Label
biotin
Label protocol
Approximately 7 µg of total RNA was processed to produce biotinylated cRNA targets.
Description
arf6 arf8 flowers, stage 13-14
Data processing
Affymetrix GeneChip Microarray Suite version 5.0
Submission date
Jun 28, 2005
Last update date
Aug 28, 2018
Contact name
Christine Ellis
Organization name
University of North Carolina at Chapel Hill
Street address
121 Coker Hall
City
Chapel Hill
State/province
NC
ZIP/Postal code
27599-3280
Country
USA
Platform ID
GPL198
Series (1)
GSE2848
Auxin Response Factor mediated flower gene expression
Relations
Reanalyzed by
GSE118579
Reanalyzed by
GSE119083
Data table header descriptions
ID_REF
VALUE
raw signal level
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
228.4
P
0.003212
AFFX-BioB-M_at
291.7
P
0.000044
AFFX-BioB-3_at
221.5
P
0.000127
AFFX-BioC-5_at
627.4
P
0.00011
AFFX-BioC-3_at
269.8
P
0.000095
AFFX-BioDn-5_at
499.8
P
0.000044
AFFX-BioDn-3_at
2189.3
P
0.000052
AFFX-CreX-5_at
5850.8
P
0.000044
AFFX-CreX-3_at
6715
P
0.000044
AFFX-DapX-5_at
17.2
A
0.123572
AFFX-DapX-M_at
16.6
A
0.227636
AFFX-DapX-3_at
3.1
A
0.966323
AFFX-LysX-5_at
1.4
A
0.804734
AFFX-LysX-M_at
6.1
A
0.834139
AFFX-LysX-3_at
20.8
A
0.340661
AFFX-PheX-5_at
4.7
A
0.814869
AFFX-PheX-M_at
4.4
A
0.783476
AFFX-PheX-3_at
8.9
A
0.772364
AFFX-ThrX-5_at
4
A
0.824672
AFFX-ThrX-M_at
5.9
A
0.712257
Total number of rows:
22810
Table truncated, full table size
590 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM62704.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
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