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Sample GSM596052 Query DataSets for GSM596052
Status Public on Dec 06, 2010
Title Gene expression_sex_1337T
Sample type RNA
 
Source name Biceps Brachii
Organism Homo sapiens
Characteristics gender: female
age: young
condition: 24h post acute resistance exercise following 12-week resistance training
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from frozen tissue with a polytron homogenizer (Brinkman, Westbury, NY) and Trizol reagent (Invitrogen, Rockville, MD) and purified with an RNAse kit (Qiagen, Santa Clara, CA).
Label Biotin
Label protocol Total RNA was used as a template for double-stranded cDNA synthesis (Superscript Double-Stranded cDNA synthesis kit, Invitrogen, Carlsbad, CA). Biotin-labelled cRNA was synthesized by using Enzo Bioarray High Yield RNA transcription Labeling Kit (Affymetrix).
 
Hybridization protocol Hybridized to Affymetrix Human Genome U133 Plus 2.0 arrays (Santa Clara, CA) according to the manufacturer’s instructions.
Scan protocol The intensity of bound dye was measured with an argon laser confocal scanner (GeneArray Scanner, Agilent).
Data processing The probe arrays were scanned twice and the stored images were analyzed using the Expression Console (Affymetrix, Santa Clara, CA). RMA data was derived by using Bioconductor.
 
Submission date Sep 20, 2010
Last update date Dec 06, 2010
Contact name GORDON PAUL
E-mail(s) [email protected]
Organization name University of Michigan
Street address 325 E Eisenhower
City Ann Arbor
State/province MI
ZIP/Postal code 48108
Country USA
 
Platform ID GPL570
Series (1)
GSE24235 Skeletal muscle gene expression in response to resistance exercise: sex specific regulation

Data table header descriptions
ID_REF
VALUE RMA data

Data table
ID_REF VALUE
1007_s_at 8.139515963
1053_at 4.705304706
117_at 3.394365967
121_at 6.574741732
1255_g_at 2.69232869
1294_at 4.65185196
1316_at 4.790281026
1320_at 3.946135507
1405_i_at 3.130137273
1431_at 2.849379815
1438_at 4.660885532
1487_at 8.087002368
1494_f_at 4.76892506
1552256_a_at 5.083678012
1552257_a_at 5.936024982
1552258_at 3.213930351
1552261_at 3.511238734
1552263_at 3.003552187
1552264_a_at 6.646820621
1552266_at 2.93302474

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM596052.CEL.gz 4.2 Mb (ftp)(http) CEL
GSM596052.chp.gz 392.2 Kb (ftp)(http) CHP
Processed data included within Sample table

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