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Sample GSM552109 Query DataSets for GSM552109
Status Public on Jun 19, 2010
Title AG09319 Unstim BR2 15.11.2009
Sample type RNA
 
Source name cell line Ag09319
Organism Homo sapiens
Characteristics time point: 0hr
agent: none
cell line: Ag09319
Extracted molecule total RNA
Extraction protocol Exiqon RNA extraction kit according to manufacturers instructions
Label biotin
Label protocol Biotinylated cDNA were prepared according to the WT Affymetrix protocol from 100 ng total RNA.
 
Hybridization protocol Following fragmentation, 5.5 ug of cDNA were hybridized for 16 hr at 45C on GeneChip HuGene 1.0 ST Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix Scanner 3000 7G
Description none
Data processing The data were analyzed with Affymetrix Expression Console ver. 1.0. using Affymetrix default analysis settings and RMA normalisation.
 
Submission date Jun 07, 2010
Last update date Jun 18, 2010
Contact name Thomas Thykjaer
E-mail(s) [email protected]
Organization name AROS Applied Biotechnology
Street address IncubaSciencePark Skejby
City Aarhus N
ZIP/Postal code 8220
Country Denmark
 
Platform ID GPL6244
Series (2)
GSE22174 Vitamin D and Gene Expression [A690]
GSE22176 Vitamin D and Gene Expression

Data table header descriptions
ID_REF
VALUE RMA normalized data

Data table
ID_REF VALUE
7896736 4.621538
7896738 2.555917
7896740 3.617759
7896742 4.577179
7896744 4.356253
7896746 7.040782
7896748 8.023603
7896750 3.953132
7896752 6.628475
7896754 3.942387
7896756 4.52146
7896759 5.337399
7896761 6.117683
7896779 6.201324
7896798 6.060928
7896817 5.906662
7896822 6.286182
7896859 5.021878
7896861 3.124169
7896863 5.002605

Total number of rows: 33297

Table truncated, full table size 549 Kbytes.




Supplementary file Size Download File type/resource
GSM552109.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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