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Sample GSM550391 Query DataSets for GSM550391
Status Public on Aug 11, 2010
Title WB-H-2804
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 14
gender: Male
ethnicity: Hispanic
healthy control: pSLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -4.714761 0.7931489
ILMN_2055271 14.09238 0.02371541
ILMN_1736007 -1.754968 0.5836627
ILMN_2383229 -13.84182 0.9947299
ILMN_1806310 2.901107 0.2555995
ILMN_1779670 -2.602148 0.6561265
ILMN_2321282 5.495276 0.1422925
ILMN_1671474 4.285878 0.1818182
ILMN_1772582 5.889621 0.1343874
ILMN_1735698 2.055001 0.3096179
ILMN_1653355 9.293064 0.06455863
ILMN_1717783 -0.4367411 0.4822134
ILMN_1705025 5.336601 0.1462451
ILMN_1814316 -3.379404 0.7035573
ILMN_2359168 -1.716869 0.5823452
ILMN_1731507 -2.104228 0.6073781
ILMN_1787689 4.343955 0.1765481
ILMN_1745607 3.727206 0.2055336
ILMN_2136495 3.795303 0.201581
ILMN_1668111 -3.624689 0.7220026

Total number of rows: 48803

Table truncated, full table size 1475 Kbytes.




Supplementary file Size Download File type/resource
GSM550391_4856050050_J_Raw.txt.gz 528.5 Kb (ftp)(http) TXT
Processed data included within Sample table

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