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Sample GSM550377 Query DataSets for GSM550377
Status Public on Aug 11, 2010
Title WB-H-9371
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 17
gender: Male
ethnicity: Hispanic
healthy control: Strep and Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -8.058235 0.8471673
ILMN_2055271 5.631602 0.2068511
ILMN_1736007 -10.0593 0.9275362
ILMN_2383229 -7.956004 0.8432148
ILMN_1806310 -8.647904 0.8814229
ILMN_1779670 -4.686226 0.6745718
ILMN_2321282 3.77984 0.2437418
ILMN_1671474 0.8845017 0.3504611
ILMN_1772582 -0.5499011 0.4216074
ILMN_1735698 -2.644274 0.541502
ILMN_1653355 21.50821 0.02898551
ILMN_1717783 -11.05373 0.9499341
ILMN_1705025 -4.028377 0.6416337
ILMN_1814316 -9.555129 0.9104084
ILMN_2359168 1.046374 0.3412385
ILMN_1731507 -10.59383 0.9407114
ILMN_1787689 3.845418 0.2437418
ILMN_1745607 0.9226833 0.3465086
ILMN_2136495 -10.94791 0.9486166
ILMN_1668111 -2.676739 0.544137

Total number of rows: 48803

Table truncated, full table size 1504 Kbytes.




Supplementary file Size Download File type/resource
GSM550377_4676163046_G_Raw.txt.gz 534.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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