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Sample GSM550374 Query DataSets for GSM550374
Status Public on Aug 11, 2010
Title WB-H-9369
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 18
gender: Male
ethnicity: Hispanic
healthy control: Strep and Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -11.63282 0.9776021
ILMN_2055271 -2.735752 0.6007905
ILMN_1736007 -3.792237 0.6719368
ILMN_2383229 0.2578017 0.4202898
ILMN_1806310 -7.750511 0.8801054
ILMN_1779670 -3.321877 0.6416337
ILMN_2321282 -4.500563 0.7206851
ILMN_1671474 3.271156 0.2648221
ILMN_1772582 -4.643926 0.7312253
ILMN_1735698 6.512734 0.1475626
ILMN_1653355 11.6523 0.05665349
ILMN_1717783 0.28429 0.4189723
ILMN_1705025 -1.999346 0.5573123
ILMN_1814316 2.396483 0.3043478
ILMN_2359168 -4.354526 0.7167326
ILMN_1731507 -2.395685 0.5862978
ILMN_1787689 0.3533591 0.4163373
ILMN_1745607 -1.774776 0.5454546
ILMN_2136495 -3.39198 0.6495389
ILMN_1668111 4.215583 0.2332016

Total number of rows: 48803

Table truncated, full table size 1498 Kbytes.




Supplementary file Size Download File type/resource
GSM550374_4676163046_D_Raw.txt.gz 529.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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