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Sample GSM550372 Query DataSets for GSM550372
Status Public on Aug 11, 2010
Title WB-H-9361
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 8
gender: Male
ethnicity: Hispanic
healthy control: Strep and Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -6.784927 0.8036891
ILMN_2055271 16.31402 0.04084321
ILMN_1736007 3.730962 0.2608696
ILMN_2383229 -4.833287 0.7022398
ILMN_1806310 -3.33948 0.6179183
ILMN_1779670 2.807325 0.2951252
ILMN_2321282 8.700111 0.1383399
ILMN_1671474 0.2304245 0.4202898
ILMN_1772582 -1.905071 0.5388669
ILMN_1735698 -1.035758 0.4927536
ILMN_1653355 9.212265 0.1304348
ILMN_1717783 -7.654284 0.8313571
ILMN_1705025 6.718169 0.1765481
ILMN_1814316 -9.654116 0.8998682
ILMN_2359168 -4.350321 0.6798419
ILMN_1731507 -3.865022 0.6482214
ILMN_1787689 15.07715 0.04611331
ILMN_1745607 -9.509293 0.8919631
ILMN_2136495 -12.89403 0.9736496
ILMN_1668111 -12.21635 0.9657444

Total number of rows: 48803

Table truncated, full table size 1477 Kbytes.




Supplementary file Size Download File type/resource
GSM550372_4676163046_B_Raw.txt.gz 529.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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