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Sample GSM550370 Query DataSets for GSM550370
Status Public on Aug 11, 2010
Title WB-H-2811
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 10
gender: Female
ethnicity: Hispanic
healthy control: Strep and Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -5.15966 0.7549407
ILMN_2055271 16.93946 0.02503294
ILMN_1736007 -0.08392983 0.4466403
ILMN_2383229 -1.661659 0.5480896
ILMN_1806310 -1.103006 0.5098814
ILMN_1779670 0.0138336 0.4440053
ILMN_2321282 3.817594 0.2463768
ILMN_1671474 2.527763 0.3030303
ILMN_1772582 8.010186 0.1238472
ILMN_1735698 -4.67422 0.7351779
ILMN_1653355 8.871713 0.1040843
ILMN_1717783 -16.1437 0.9986825
ILMN_1705025 -1.066517 0.5072464
ILMN_1814316 -7.311716 0.8642951
ILMN_2359168 -1.548905 0.5388669
ILMN_1731507 -2.978172 0.6284585
ILMN_1787689 2.25431 0.3201581
ILMN_1745607 -6.819781 0.8366271
ILMN_2136495 -4.222151 0.7061924
ILMN_1668111 -2.478771 0.599473

Total number of rows: 48803

Table truncated, full table size 1477 Kbytes.




Supplementary file Size Download File type/resource
GSM550370_4676163045_L_Raw.txt.gz 529.5 Kb (ftp)(http) TXT
Processed data included within Sample table

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