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Sample GSM550368 Query DataSets for GSM550368
Status Public on Aug 11, 2010
Title WB-H-0565
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 8
gender: Male
ethnicity: Caucasian
healthy control: Strep and Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -7.223311 0.8682477
ILMN_2055271 12.80282 0.04347826
ILMN_1736007 2.160502 0.3227932
ILMN_2383229 -6.486938 0.8313571
ILMN_1806310 -6.084442 0.8063241
ILMN_1779670 1.030737 0.3860343
ILMN_2321282 5.687706 0.1752306
ILMN_1671474 0.8999652 0.3873518
ILMN_1772582 1.43778 0.3623188
ILMN_1735698 9.014604 0.09222662
ILMN_1653355 11.17669 0.06324111
ILMN_1717783 0.1618838 0.4255599
ILMN_1705025 4.07909 0.2358366
ILMN_1814316 -2.621019 0.5981554
ILMN_2359168 -2.198095 0.5704875
ILMN_1731507 -9.374637 0.942029
ILMN_1787689 5.041353 0.198946
ILMN_1745607 -5.836682 0.7931489
ILMN_2136495 -6.75253 0.8418972
ILMN_1668111 3.253579 0.2753623

Total number of rows: 48803

Table truncated, full table size 1485 Kbytes.




Supplementary file Size Download File type/resource
GSM550368_4676163043_L_Raw.txt.gz 530.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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