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Sample GSM550356 Query DataSets for GSM550356
Status Public on Aug 11, 2010
Title WB-H-7836
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 43
gender: Female
ethnicity: Caucasian
healthy control: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 1.046229 0.400527
ILMN_2055271 7.354472 0.1119895
ILMN_1736007 7.532556 0.1054018
ILMN_2383229 -9.276458 0.9486166
ILMN_1806310 -4.298491 0.7246377
ILMN_1779670 17.16004 0.01449275
ILMN_2321282 8.50038 0.08432148
ILMN_1671474 -2.984662 0.6403162
ILMN_1772582 -3.505587 0.6745718
ILMN_1735698 1.173177 0.3939394
ILMN_1653355 24.27354 0.006587615
ILMN_1717783 -9.035811 0.9472991
ILMN_1705025 4.71501 0.2108037
ILMN_1814316 -10.42587 0.969697
ILMN_2359168 2.512495 0.312253
ILMN_1731507 -12.53904 0.9907773
ILMN_1787689 3.542632 0.2542819
ILMN_1745607 -0.3681173 0.486166
ILMN_2136495 1.035931 0.4018445
ILMN_1668111 -6.687691 0.8669302

Total number of rows: 48803

Table truncated, full table size 1472 Kbytes.




Supplementary file Size Download File type/resource
GSM550356_4487653207_F_Raw.txt.gz 525.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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