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Sample GSM550354 Query DataSets for GSM550354
Status Public on Aug 11, 2010
Title WB-H-7833
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 35
gender: Female
ethnicity: Asian
healthy control: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -2.228495 0.6179183
ILMN_2055271 13.33743 0.03030303
ILMN_1736007 3.7655 0.2187088
ILMN_2383229 -2.975087 0.6627141
ILMN_1806310 0.582293 0.4031621
ILMN_1779670 -0.9709946 0.5217391
ILMN_2321282 1.749475 0.3372859
ILMN_1671474 6.790081 0.1238472
ILMN_1772582 -5.415646 0.8155468
ILMN_1735698 6.962939 0.1225296
ILMN_1653355 24.90815 0.005270092
ILMN_1717783 0.3688884 0.4189723
ILMN_1705025 9.834013 0.0685112
ILMN_1814316 3.75122 0.2187088
ILMN_2359168 -0.07597157 0.4505929
ILMN_1731507 -0.4910149 0.4888011
ILMN_1787689 -0.8286223 0.513834
ILMN_1745607 0.9067589 0.3754941
ILMN_2136495 -1.142827 0.5335968
ILMN_1668111 -5.442571 0.8155468

Total number of rows: 48803

Table truncated, full table size 1484 Kbytes.




Supplementary file Size Download File type/resource
GSM550354_4487653207_D_Raw.txt.gz 526.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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