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Sample GSM550350 Query DataSets for GSM550350
Status Public on Aug 11, 2010
Title WB-H-4259
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 43
gender: Male
ethnicity: Caucasian
healthy control: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -18.33277 0.9881423
ILMN_2055271 10.00677 0.1515152
ILMN_1736007 0.1665595 0.3715415
ILMN_2383229 -15.10574 0.9631094
ILMN_1806310 0.2886108 0.3689065
ILMN_1779670 -1.899493 0.455863
ILMN_2321282 4.581155 0.2397892
ILMN_1671474 -2.240037 0.4650856
ILMN_1772582 -1.51725 0.4361001
ILMN_1735698 -0.5136369 0.4018445
ILMN_1653355 9.921074 0.1528327
ILMN_1717783 -2.300744 0.4664032
ILMN_1705025 -4.542747 0.5480896
ILMN_1814316 -2.014056 0.458498
ILMN_2359168 -5.419588 0.5902503
ILMN_1731507 -4.640041 0.5533597
ILMN_1787689 9.998556 0.1528327
ILMN_1745607 -8.15611 0.7338603
ILMN_2136495 -9.644509 0.7997365
ILMN_1668111 -19.18436 0.9907773

Total number of rows: 48803

Table truncated, full table size 1499 Kbytes.




Supplementary file Size Download File type/resource
GSM550350_4487653192_L_Raw.txt.gz 535.8 Kb (ftp)(http) TXT
Processed data included within Sample table

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