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Sample GSM550348 Query DataSets for GSM550348
Status Public on Aug 11, 2010
Title WB-H-4260
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 51
gender: Female
ethnicity: Caucasian
healthy control: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -4.436965 0.7417655
ILMN_2055271 10.21184 0.0685112
ILMN_1736007 -4.822819 0.7681159
ILMN_2383229 -10.47841 0.9762846
ILMN_1806310 0.3833714 0.4123847
ILMN_1779670 5.919108 0.1594203
ILMN_2321282 2.720354 0.2832675
ILMN_1671474 9.551288 0.07114624
ILMN_1772582 5.606121 0.1646904
ILMN_1735698 6.48805 0.14361
ILMN_1653355 19.54331 0.009222661
ILMN_1717783 -4.200057 0.7312253
ILMN_1705025 0.2906193 0.4189723
ILMN_1814316 -5.013879 0.7760211
ILMN_2359168 -5.154418 0.7839262
ILMN_1731507 -4.499085 0.7470356
ILMN_1787689 1.884688 0.3293808
ILMN_1745607 -7.680857 0.9077734
ILMN_2136495 -2.118397 0.5981554
ILMN_1668111 -4.381011 0.7404479

Total number of rows: 48803

Table truncated, full table size 1488 Kbytes.




Supplementary file Size Download File type/resource
GSM550348_4487653192_A_Raw.txt.gz 526.5 Kb (ftp)(http) TXT
Processed data included within Sample table

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