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Sample GSM550346 Query DataSets for GSM550346
Status Public on Aug 11, 2010
Title WB-H-7466
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 42
gender: Female
ethnicity: Caucasian
healthy control: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -5.04458 0.7101449
ILMN_2055271 11.65273 0.08168643
ILMN_1736007 5.792718 0.2147563
ILMN_2383229 -4.942753 0.7035573
ILMN_1806310 3.556244 0.2859025
ILMN_1779670 0.00993136 0.4505929
ILMN_2321282 4.100951 0.2621871
ILMN_1671474 12.68443 0.07641634
ILMN_1772582 -9.104919 0.8669302
ILMN_1735698 9.246234 0.1225296
ILMN_1653355 26.19118 0.01449275
ILMN_1717783 -15.3498 0.972332
ILMN_1705025 14.67077 0.05665349
ILMN_1814316 -6.089008 0.7523057
ILMN_2359168 -7.932657 0.8168643
ILMN_1731507 -5.611688 0.7351779
ILMN_1787689 -1.273728 0.5191041
ILMN_1745607 0.2167834 0.4387352
ILMN_2136495 -11.706 0.9314888
ILMN_1668111 -12.4766 0.9446641

Total number of rows: 48803

Table truncated, full table size 1486 Kbytes.




Supplementary file Size Download File type/resource
GSM550346_4487653182_H_Raw.txt.gz 527.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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