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Sample GSM550344 Query DataSets for GSM550344
Status Public on Aug 11, 2010
Title WB-H-1074
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 43
gender: Female
ethnicity: Caucasian
healthy control: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 0.7924969 0.3715415
ILMN_2055271 10.03678 0.05006588
ILMN_1736007 -1.739479 0.5691699
ILMN_2383229 2.210565 0.2714097
ILMN_1806310 1.607963 0.3201581
ILMN_1779670 4.951804 0.1515152
ILMN_2321282 6.822455 0.08959157
ILMN_1671474 5.311187 0.1343874
ILMN_1772582 -3.900633 0.7233202
ILMN_1735698 3.449953 0.2134387
ILMN_1653355 16.21969 0.02108037
ILMN_1717783 -9.064764 0.9499341
ILMN_1705025 6.548311 0.09486166
ILMN_1814316 -0.04269622 0.4492754
ILMN_2359168 -1.872243 0.5783926
ILMN_1731507 -8.809928 0.942029
ILMN_1787689 -2.284695 0.6126482
ILMN_1745607 -2.428361 0.6245059
ILMN_2136495 -1.876293 0.5783926
ILMN_1668111 -7.314709 0.9051383

Total number of rows: 48803

Table truncated, full table size 1523 Kbytes.




Supplementary file Size Download File type/resource
GSM550344_4487653181_F_Raw.txt.gz 531.5 Kb (ftp)(http) TXT
Processed data included within Sample table

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