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Sample GSM550342 Query DataSets for GSM550342
Status Public on Aug 11, 2010
Title WB-H-1052
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 45
gender: Female
ethnicity: Caucasian
healthy control: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -4.024977 0.7246377
ILMN_2055271 2.63444 0.2740448
ILMN_1736007 2.5299 0.2806324
ILMN_2383229 2.002791 0.3175231
ILMN_1806310 -1.72442 0.5612648
ILMN_1779670 9.869016 0.06060606
ILMN_2321282 6.747089 0.1185771
ILMN_1671474 -3.165037 0.6693017
ILMN_1772582 0.1153028 0.4426877
ILMN_1735698 4.520779 0.1778656
ILMN_1653355 14.12267 0.02898551
ILMN_1717783 -5.631317 0.8260869
ILMN_1705025 0.4765097 0.4216074
ILMN_1814316 -6.012616 0.8445323
ILMN_2359168 -2.420292 0.6192358
ILMN_1731507 -12.41571 0.9986825
ILMN_1787689 4.46953 0.1805007
ILMN_1745607 -5.127733 0.7931489
ILMN_2136495 5.657524 0.1422925
ILMN_1668111 -1.760936 0.5625824

Total number of rows: 48803

Table truncated, full table size 1486 Kbytes.




Supplementary file Size Download File type/resource
GSM550342_4487653173_C_Raw.txt.gz 526.8 Kb (ftp)(http) TXT
Processed data included within Sample table

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