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Sample GSM550337 Query DataSets for GSM550337
Status Public on Aug 11, 2010
Title WB-H-6635
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 50
gender: Female
ethnicity: Caucasian
healthy control: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 39.98202 0.01054018
ILMN_1660305 160.5831 0
ILMN_1792173 265.1791 0
ILMN_1762337 -0.9438573 0.483531
ILMN_2055271 10.81877 0.06324111
ILMN_1736007 6.476855 0.1515152
ILMN_1814316 -4.795726 0.7140975
ILMN_2359168 -4.439893 0.6969697
ILMN_1731507 -2.877328 0.6073781
ILMN_1787689 -0.1107488 0.4216074
ILMN_1745607 -4.948154 0.7259552
ILMN_2136495 3.276318 0.2490119
ILMN_1668111 -8.808467 0.8919631
ILMN_2295559 0.6862584 0.3807642
ILMN_1735045 -2.406805 0.5757576
ILMN_1680754 3.092714 0.256917
ILMN_2375184 -1.971298 0.5520422
ILMN_1659452 1.969358 0.312253
ILMN_1767388 0.400984 0.3965744
ILMN_1675204 -12.80895 0.9749671

Total number of rows: 48803

Table truncated, full table size 1480 Kbytes.




Supplementary file Size Download File type/resource
GSM550337_4447846384_J_Raw.txt.gz 527.4 Kb (ftp)(http) TXT
Processed data included within Sample table

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