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Sample GSM550329 Query DataSets for GSM550329
Status Public on Aug 11, 2010
Title WB-H-2289
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 38
gender: Male
ethnicity: Caucasian
healthy control: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 42.99736 0.006587615
ILMN_1660305 154.1832 0
ILMN_1792173 173.2253 0
ILMN_1762337 -6.974189 0.8590251
ILMN_2055271 7.268407 0.1198946
ILMN_1736007 6.013216 0.1607378
ILMN_1814316 -5.343934 0.7733861
ILMN_2359168 -1.587251 0.5204216
ILMN_1731507 1.240859 0.3372859
ILMN_1787689 6.65872 0.1383399
ILMN_1745607 -8.277478 0.914361
ILMN_2136495 -0.3152353 0.4361001
ILMN_1668111 -6.595488 0.8418972
ILMN_2295559 -5.531327 0.7852437
ILMN_1735045 -4.529852 0.7404479
ILMN_1680754 -5.316882 0.7720685
ILMN_2375184 -6.084693 0.8115942
ILMN_1659452 10.76109 0.06060606
ILMN_1767388 -1.414227 0.5032938
ILMN_1675204 -4.79495 0.7483531

Total number of rows: 48803

Table truncated, full table size 1462 Kbytes.




Supplementary file Size Download File type/resource
GSM550329_4424548045_K_Raw.txt.gz 523.5 Kb (ftp)(http) TXT
Processed data included within Sample table

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